Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2445 ATGGCAACTCTAGTTGAACCTCCGAACAGAATTAAGCCAAAGGGAAAGCATTATTATACAATATGGCAAACATTGTTTGAGATTGATACGAAGTACGTTCCAATCAAGCCTATTGGCCGAGGAGCATATGGCGTGGTGTGCTCTTCCATCAACAGGGAGACCAATGAGAGAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATTCTATTGATGCTCTGAGAACTTTAAGGGAACTGAAGCTGCTCAGACATATTCGGCATGAGAATGTCATTGCTTTGAAAGATGTTATGATGCCAATCCAGAGGACAAGTTTTAAGGATGTGTACTTGGTCTACGAACTCATGGATACCGATCTTCACCAAATTATTAAGTCCTCGCAGCCACTTTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTTCTTCGAGGTCTTAAATACCTTCATTCAGCAAATATTCTTCACCGGGATTTGAAGCCTGGGAATCTGCTCATAAATGCCAATTGTGATTTGAAGATATGTGACTTTGGGCTTGCACGAACTAATGGAGTTGATGGTCAGTTTATGACAGAATATGTTGTCACTCGTTGGTATCGCGCACCGGAGCTCTTGCTATGCTGTGACAACTACGGGACCTCTATTGATGTCTGGTCAGTAGGGTGCATCTTTGCTGAGATTCTTGGTAGAAAGCCAATCTTCCCTGGCACTGAGTGTCTCAACCAACTGAAACTAATTATTAGTGTTCTTGGAAGCCAGCATGAATCTCATATTGAGTTTATTGATAACGCAAAAGCCAGGAGGTTTATCAAATCACTGCCCTATACAAGGGGGAGACACTTCTCTCAGCTGTATCCACAAGCAGATCCATTAGCCATAGACTTGTTGCAAAAGATGCTTGTATTTGATCCAACCAAGAGAATTACTGTCTTAGAAGCACTCCAACACCCTTATATGTCTGGCCTATATGATCCAAGGTGCAACCCTCCTGCTCAGGTTCCCATCAGTCTTGACATAGATGAACACTGGGGAGAACAGATGATTAGGGAAATGATGTGGAATGAGATGCTACATTATCACCCTGAAGCTGTTTCTGCCAATGCATAG 1107 0.4192 MATLVEPPNRIKPKGKHYYTIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNERVAIKKIGNIFENSIDALRTLRELKLLRHIRHENVIALKDVMMPIQRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQHESHIEFIDNAKARRFIKSLPYTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMSGLYDPRCNPPAQVPISLDIDEHWGEQMIREMMWNEMLHYHPEAVSANA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2445 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2445 368 CDD STKc_TEY_MAPK 26 361 - -
Pvu2g2445 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Pvu2g2445 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pvu2g2445 368 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2445 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Pvu2g2445 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Pvu2g2445 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Pvu2g2445 368 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Pvu2g2445 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2445 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Pvu2g2445 368 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2445 Pvu-Chr2 40326916 40330333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2445 1 368 MAP Kinase Gene Family AT2G18170 85.598 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pvu2g2445 Pkinase 1.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2445 K20537 - gmx:100783422 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2445 2 40326916 40330333 Pvu2g2445 2 40326916 40330333 ECH