Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2405 CTTGGGAACAAGTGGAGCAGGCCAACGGGCCCAAACATAGTTTGGGCTTCGAGAGAGTATAGGATTAGGGTTTATGATGTGCCCTTGCCATTAGTTTTTCAATTAACATCACATTTGGTTGCGCCTCTGTTCTCTGCCACCGCTGTGTCCATCGCAACCATGCCTAAGCAAATTCACGAGATTAAGGACTTCCTTCTCACTGCCAGAAGGAAGGATGCGAGGTCGGTGAAGATCAAGAGGAGCAGAGACGTGGTTAAGTTCAAGGTTAGATGCTCCAAGTACCTCTACACACTCTGTGTGTTTGACCCAGAGAAAGCTGATAAATTGAAGCAATCACTTCCTCCAGGTTTGAGTGTTCAAGACCTGTAA 369 0.4688 LGNKWSRPTGPNIVWASREYRIRVYDVPLPLVFQLTSHLVAPLFSATAVSIATMPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2405 122 Gene3D - 54 122 IPR038464 -
Pvu2g2405 122 PANTHER 60S RIBOSOMAL PROTEIN L38 54 122 IPR002675 GO:0003735|GO:0005840|GO:0006412
Pvu2g2405 122 PANTHER 60S RIBOSOMAL PROTEIN L38 54 122 - -
Pvu2g2405 122 Pfam Ribosomal L38e protein family 55 121 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2405 Pvu-Chr2 39946863 39948238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2405 54 122 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 1.38e-43 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2405 K02923 - gmx:100805669 140.584