Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2397 ATGAACCATGGGTACATTGCCTATGATTTGGTCATGGTCACTCTATCCTTGTCCCTCATAATTCTTGGTGTTGTCCTCTTTCTTGCATGCAAGAAGAAACAAGTTGAGTGCGAAGAAACTCCTTCTGTGAAGCACTGTGCTCGTGTGTACTCACTGATGGACATTGATGCTGTCACTGATGGCTTCAACCACAGGAGAATTGTGGGAAAGGGTCGTCTAGGAACCGTGTATGCTGGGGTGCAGGAGAATGGAGAGCTTGTGGCTGTGAAAAGGATCCATCCCGTGCTTGTGTTGAGCAATGCAGGGTTAGGATTCTCATCAGCGTTGAAATGGCTCTCTTCAGTTCAACATCCCAACATAGTTCCTATAATTGGATTTTCAGAAGCACCGGGTGAGAGAGTTATAGTGATGGAGTTTGTGCGCATGACGAGCTTGGAGTTCTATCTGCACCAAAACGTTAATGGAGCATCTCTTTTGGATTGGAACAAGAGGATTAGAATAGCAGCAGGGGCAGCAAGAGGGGTTCAGTACCTGCATGAAGTGGCAACACCAAACATTATACATGGGCGCGTCAAGTCCTCAAATGTTTTAATTGATATAAACTTTTGTCCTAGGATTTGTGATTATGGTTTAGACTTTTTGGCACCCCGAGAAAAGAGAGAGCTAGTAGGTGATGTGGATGATGAGTATTGGAACCAAAGAGGGGGTGGTGCAAGCAAGGAAAGTGATGTTTATGGGTTAGGGATTGTGATGCTTGAGCTATTAAGTGGTAGAGGATGCAAGGAAGGAGTGACAGCAGAGTGGTGTTTGGGTTTGATCAAAGCATTGAGTTTTGGTGAAGTTTTGGATCCTAGGTTGGTAATTCCTTCTGACATGAAGCCTTTGTTTAGATTAGCCAAAGTTGCCTCAGCTTGCGTTGCTAATTCAAGGAAGTGTAGGCCTTCCATAGAACAAGTCACAACTATTTTGAACAATTTAGAGATGGAAGTGTGCATATGA 999 0.4414 MNHGYIAYDLVMVTLSLSLIILGVVLFLACKKKQVECEETPSVKHCARVYSLMDIDAVTDGFNHRRIVGKGRLGTVYAGVQENGELVAVKRIHPVLVLSNAGLGFSSALKWLSSVQHPNIVPIIGFSEAPGERVIVMEFVRMTSLEFYLHQNVNGASLLDWNKRIRIAAGAARGVQYLHEVATPNIIHGRVKSSNVLIDINFCPRICDYGLDFLAPREKRELVGDVDDEYWNQRGGGASKESDVYGLGIVMLELLSGRGCKEGVTAEWCLGLIKALSFGEVLDPRLVIPSDMKPLFRLAKVASACVANSRKCRPSIEQVTTILNNLEMEVCI* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2397 332 Gene3D Transferase(Phosphotransferase) domain 1 141 330 - -
Pvu2g2397 332 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 4 331 - -
Pvu2g2397 332 SUPERFAMILY Protein kinase-like (PK-like) 40 323 IPR011009 -
Pvu2g2397 332 Gene3D Phosphorylase Kinase; domain 1 25 139 - -
Pvu2g2397 332 Pfam Protein kinase domain 63 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2397 332 ProSiteProfiles Protein kinase domain profile. 62 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2397 332 PIRSF ILK 29 331 - -
Pvu2g2397 332 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2397 Pvu-Chr2 39860936 39861934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2397 47 323 Receptor kinase-like Gene Family AT3G59420 39.175 3.07e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu2g2397 Pkinase 3.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2397 - - gmx:100809726 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2397 2 39860936 39861934 Pvu6g1885 6 29104591 29105595 PCT