Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2389 ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCTAAACGCCAATACACGCTTCAGCATCACCATCAAAATTCTCATTTAGATCGGTTGGGAATCGATGATTTTGATGTGGAAGAAGAGGTGCGACCCGATTTCCCTTGCCCCTATTGTTATGAAGACTTTGACATCGCGTCTTTGTGCTCTCATCTCGAAGACGAACATTCTTGTGAATCAAGAGTCACGATTTGTCCTATATGCTCCGTTAAAGTTGCAAGGGACATGTTAAGTCACATAACGCTGCAACATGGGCACTTATTCAAGGTACAGAGAAGACGCAGGTTAAGAAGAGTTGCTCTTCCAAACACTCAGACATTGTCTATCTTGGGTCGAGATCTTCGTGAGGCTCATCTACAAGTGCTTCTTGGTGGTGGTGGCGGAGGAGGATACCGGTCAAACAGTGCAGCAGTGTCTAATGTTGCTACTGATCCCTTTCTATCCTCATTTATTTTGAATTTCCCGGCCTCTGAAGCTGAAGAGATTTCAAAATCTGTGGTAACAACGGCTGAGGATTCTTCTGCCAAAAATGTGACACCTGAACATATTTGGAAATCAAGTTTTGATCCCTCCTTGAGCACTGAAGAGCGAGAGAAAAGGATGAGACAAGCTGCTGGGAGATCTGGTTTTGTGCAGGACTTGTTTCTTTCAACTTTGTTAGGCGACTGA 705 0.4511 MDSDFWTSRLAAAKRQYTLQHHHQNSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCESRVTICPICSVKVARDMLSHITLQHGHLFKVQRRRRLRRVALPNTQTLSILGRDLREAHLQVLLGGGGGGGYRSNSAAVSNVATDPFLSSFILNFPASEAEEISKSVVTTAEDSSAKNVTPEHIWKSSFDPSLSTEEREKRMRQAAGRSGFVQDLFLSTLLGD* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2389 234 Pfam Stress-induced protein Di19, C-terminal 119 231 IPR027935 -
Pvu2g2389 234 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 233 - -
Pvu2g2389 234 Pfam Drought induced 19 protein (Di19), zinc-binding 45 97 IPR008598 -
Pvu2g2389 234 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 233 IPR033347 -
Pvu2g2389 234 SUPERFAMILY TRAF domain-like 46 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2389 Pvu-Chr2 39734993 39737999 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu2g2389 Di19_C 6.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2389 - - gmx:100792230 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2389 2 39734993 39737999 Pvu2g2389 2 39734993 39737999 ECH