Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2360 ATGGATGATGATGGCAGCAATTCTTGGCTAAGGAGGACGAAATTCTCCCACACAGTATGTCACCGGTTGGATTATTCCAGTTCCAGATTAGGGTCTTTCAGCATTCAGCCAAGGTCACAGCACAGTTCCAGTGCGAAATCAAGGCCAGATGTAACTTTTGTTTCCAAACCCTCCTCGCAGGTTCTGAAAAAGCCCATAATGAGCAAGCAGAGATCTTTGTCCCCTTTGCCTGAAACCTCTCTCTCTGAAACCTTCAAGGAAGCTAGACATGAGCGGAAGAGGTTCTCCACACCTGGTCCAAGGAGGAAGGAGCATGATAAGAGAATCATGGGGAAGTTACTGAACAAGGATTCTCATGTATCCAGTTCTAAATCCCCTTACAGCAGTCCAATGATTAAATCCCCTTACAACAGTCCAATGACCAAATCCCCTTACAGCAGTCCAATTAGACACCTTGCTTCAATGAAATTAAGCGACAAGTCCAAACAGCGCAAGGATTCAGGATGGACAAAGTATTTTGAACATGGAGGAGGAAAGGTGACTGCTGTGGAAACAGCTGAGGAATGGAATGTTGATCTCTCTAAGCTCTTTGTTGGTGTTAGGTTTGCTCATGGGGCTCACAGCAGGCTTTACCATGGCATGTATGAGGATGAAGCTGTGGCTGTAAAAATTATCAGGGTACCAGATGATGACGAAAATGGAATATTAGCTGATCGATTAGAGAAACAATTCATTAGAGAAGTGACACTTTTATCTCGTCTCCACCATCGAAATGTTATAAAGTTCGTAGCAGCATGCAGAAAGCCGCCTGTGTATTGTGTTATCACAGAATATCTATCAGAAGGTTCCTTGAGGTCATATTTGCATAAGTTGGAGACAAAAACTATTCCTCTGGAGAAGCTAATTGCTTTTGCTCTGGATATTGCTCGTGGGATGGAATACATACACTCTCAAGGTGTCATTCACCGAGACCTTAAGCCAGAGAATGTCCTTATTAATGAAGACTTTCACCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGCTTACTGTGACTTGTTTGCTGATGACCCTGGTACCTACCGCTGGATGGCACCTGAGATGATCAAACGAAAATCCTATGGGAGAAAGGTTGATGTATATAGTTTCGGGCTTATCTTGTGGGAAATGGTTACTGGAACTATCCCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCAGTAGTAAACAAGAATTCAAGGCCAGTTATTCCTTCAGACTGTCCAGCTGCAATGCGAGCTTTAATCGAGCAATGTTGGTCTTTGAATCCGGACAAGAGGCCTGAGTTCTGGCAGGTTGCTAAGGTATTAGAACAATTTGAATCTTCGCTTGCTCGTGAAGGAACCCTGACTCTGGTGCAAAACCCTTGTTGTCAAGATCATAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGTCCTGTGCATCAAAACAATGGTCCTGTGCCTAAACCCAAATTTACATGA 1512 0.4365 MDDDGSNSWLRRTKFSHTVCHRLDYSSSRLGSFSIQPRSQHSSSAKSRPDVTFVSKPSSQVLKKPIMSKQRSLSPLPETSLSETFKEARHERKRFSTPGPRRKEHDKRIMGKLLNKDSHVSSSKSPYSSPMIKSPYNSPMTKSPYSSPIRHLASMKLSDKSKQRKDSGWTKYFEHGGGKVTAVETAEEWNVDLSKLFVGVRFAHGAHSRLYHGMYEDEAVAVKIIRVPDDDENGILADRLEKQFIREVTLLSRLHHRNVIKFVAACRKPPVYCVITEYLSEGSLRSYLHKLETKTIPLEKLIAFALDIARGMEYIHSQGVIHRDLKPENVLINEDFHLKIADFGIACEEAYCDLFADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPVIPSDCPAAMRALIEQCWSLNPDKRPEFWQVAKVLEQFESSLAREGTLTLVQNPCCQDHKKGLLHWIQKLGPVHQNNGPVPKPKFT* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2360 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Pvu2g2360 503 PRINTS Tyrosine kinase catalytic domain signature 276 289 IPR001245 GO:0004672|GO:0006468
Pvu2g2360 503 PRINTS Tyrosine kinase catalytic domain signature 314 332 IPR001245 GO:0004672|GO:0006468
Pvu2g2360 503 PRINTS Tyrosine kinase catalytic domain signature 360 370 IPR001245 GO:0004672|GO:0006468
Pvu2g2360 503 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Pvu2g2360 503 PRINTS Tyrosine kinase catalytic domain signature 423 445 IPR001245 GO:0004672|GO:0006468
Pvu2g2360 503 SMART serkin_6 196 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2360 503 SUPERFAMILY Protein kinase-like (PK-like) 182 452 IPR011009 -
Pvu2g2360 503 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 479 - -
Pvu2g2360 503 Pfam Protein tyrosine and serine/threonine kinase 203 451 IPR001245 GO:0004672|GO:0006468
Pvu2g2360 503 Gene3D Phosphorylase Kinase; domain 1 184 280 - -
Pvu2g2360 503 MobiDBLite consensus disorder prediction 116 145 - -
Pvu2g2360 503 MobiDBLite consensus disorder prediction 32 145 - -
Pvu2g2360 503 ProSiteProfiles Protein kinase domain profile. 196 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2360 503 Gene3D Transferase(Phosphotransferase) domain 1 281 479 - -
Pvu2g2360 503 PANTHER TYROSINE KINASE FAMILY PROTEIN 5 479 - -
Pvu2g2360 503 CDD STKc_MAP3K-like 203 452 - -
Pvu2g2360 503 MobiDBLite consensus disorder prediction 83 114 - -
Pvu2g2360 503 MobiDBLite consensus disorder prediction 32 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2360 Pvu-Chr2 39459783 39464317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2360 3 503 MAP Kinase Kinase Kinase AT5G58950 57.011 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pvu2g2360 PK_Tyr_Ser-Thr 3.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2360 - - gmx:100784454 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2360 2 39459783 39464317 Pvu6g1916 6 29369763 29373270 PCT