Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2355 ATGGCGAGTCTGTTTGGCTCATCGTCTTCCGCTCCGTTCAAGATGAGAGTCACCAACACGCCCTCCACCGACCTCGTTCTCACCAACCTCGCCTTCTGTTCCCCCTCCGATCTTCGCAACTTCGCCGTTCCCGGTCACAAAAACCTCTACCTCGCCACCATCGCCGATTCCTTCGTCCTATCTCTCTCTGCTCATGACAGCATAGGCAACGGCCAGATTGGGTTGAACTCCATTCAACGGCGGTGTGCCAAAGTTTCTGCTGGTGATTCCGTACAATTGACCCTATTTGTGCCTCCCGATGACTTCAACCTCGCACTGTTGACCATTGATTTGGAATTTGTTAAAAAGGGGAATAAGAGTGAGCAGATTGATGCTGTTCTACTGGCTAAGCAACTTCGGAAGAGATTTTTAAACCAGGTTATGACTGCGGGGCAAAAAGTGTTATTTGAGTACCATGGAAATAACTATAGCTTTACTGTCAGTCAAGCTGCAGTTGAAGGCCAACAAAAGTCCAATTCTCTTGAAAGAGGGTTGATTTCTGATGACACATACATTGTTTTTGAGACATCACGTGATAGTGGAATTAAGATTGTCAATCAACGGGAGGGTGCAACTAGCAACATTTTCAAGCAGAAAGAATTTAACCTTCAGTCACTGGGTATTGGTGGTTTGAGTGCAGAATTTGCTGATATATTTCGAAGAGCTTTTGCCTCTCGTGTTTTCCCTCCTCATGTGACATCTAAATTAGGAATCAAGCATGTAAAGGGCATGCTTCTTTATGGGCCTCCTGGAACTGGAAAGACACTTATGGCACGTCAAATTGGAAAAATTTTGAATGGGAAGGAACCAAAGATTGTAAATGGCCCTGAAGTTTTGAGCAAATTTGTTGGTGAGACTGAAAAGAATGTGAGAGACCTTTTTGCTGATGCTGAACAGGATCAGAGGACCCGAGGGGATGAAAGTGATTTGCATGTTATAATCTTTGATGAAATTGATGCTATTTGTAAGTCAAGGGGTTCAACTCGGGATGGTACTGGAGTTCATGACAGCATTGTAAATCAGCTTCTTACTAAGATAGATGGTGTGGAGTCACTCAATAATGTTTTGCTTATTGGAATGACTAACAGAAAGGATATGCTTGATGAAGCTCTCTTAAGACCCGGGAGATTAGAAGTGCAGGTTGAGATAAGCCTTCCTGATGAGAATGGTCGATTGCAAATTCTTCAAATTCACACTAACAAAATGAAAGAGAATTCTTTTCTAGCTCCTGATGTGAACCTTCAAGAGCTTGCTGCTCGAACAAAAAACTACAGTGGTGCAGAACTTGAAGGTGTTGTGAAAAGTGCCGTGTCATATGCTTTAAATAGACAATTGAGTCTGGATGATCTCACTAAGCAAGTGGATGAAGAGAACATTAAGGTTACAATGGATGACTTTCTGAATGCACTCCATGAAGTTATTCCGGCATTTGGTGCTTCAACTGATGATCTTGAAAGATGCAGACTCCATGGCATGGTGGACTGTGGTGATCGACATAAGCACATTTATCAAAGATCAATGTTACTTGTGGAGCAAGTTAAAGTGAGTAAAGGAAGCCCACTTGTCACTTGTCTCCTGGAAGGATCCCGTGGCAGTGGTAAAACTGCACTAGCAGCTACTGTTGGTATTGACAGCGATTTCCCATATGTCAAGATAGTTTCAGCAGAAACAATGATTGGTCTACATGAGAGCACCAAATGTGCACAGATTATTAAGGTTTTTGAGGATGCATACAGGTCACCGTTGAGTGTCATAGTTCTTGATGACATTGAGAGATTATTAGAGTATGTGGCCATTGGTCCTCGTTTTTCAAACTTGATTTCTCAGACACTACTGGTTCTGCTCAAACGGCTTCCTCCAAAGGGGAAAAAACTCATGGTTGTTGGCACAACAAGTGAACTGGATTTCTTAGACTCAATTGGATTTTGTGATACCTTCTCTGTTACTTACCACGTTCCTACATTGAACACAAAGGATGCAAAGAATGTCCTTGAACAGTTGAATGTGTTCTCTGATGAAGATATTGATTCTGCTGCAGAGGCATTGAATGATATGCCTATCAGGAAGCTATACATGTTGATTGAAATGGCAGCGCAAGGGGAGCAAGGTGGATCTGCAGAGGCCATCTATTCTGGCAAAGAGAAGATTAATATCTCTCATTTCTATGATTGCCTCCAGGATGTTGTTAGATTATAA 2235 0.4242 MASLFGSSSSAPFKMRVTNTPSTDLVLTNLAFCSPSDLRNFAVPGHKNLYLATIADSFVLSLSAHDSIGNGQIGLNSIQRRCAKVSAGDSVQLTLFVPPDDFNLALLTIDLEFVKKGNKSEQIDAVLLAKQLRKRFLNQVMTAGQKVLFEYHGNNYSFTVSQAAVEGQQKSNSLERGLISDDTYIVFETSRDSGIKIVNQREGATSNIFKQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKILNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTRGDESDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELEGVVKSAVSYALNRQLSLDDLTKQVDEENIKVTMDDFLNALHEVIPAFGASTDDLERCRLHGMVDCGDRHKHIYQRSMLLVEQVKVSKGSPLVTCLLEGSRGSGKTALAATVGIDSDFPYVKIVSAETMIGLHESTKCAQIIKVFEDAYRSPLSVIVLDDIERLLEYVAIGPRFSNLISQTLLVLLKRLPPKGKKLMVVGTTSELDFLDSIGFCDTFSVTYHVPTLNTKDAKNVLEQLNVFSDEDIDSAAEALNDMPIRKLYMLIEMAAQGEQGGSAEAIYSGKEKINISHFYDCLQDVVRL* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2355 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 497 713 IPR027417 -
Pvu2g2355 744 PANTHER BNAA03G50350D PROTEIN 8 40 - -
Pvu2g2355 744 PANTHER BNAA03G50350D PROTEIN 62 744 - -
Pvu2g2355 744 SMART CDC48_2_2 122 185 IPR004201 -
Pvu2g2355 744 ProSitePatterns AAA-protein family signature. 368 386 IPR003960 GO:0005524|GO:0016887
Pvu2g2355 744 PANTHER VESICULAR-FUSION PROTEIN NSF 8 40 IPR039812 GO:0016887|GO:0035494
Pvu2g2355 744 PANTHER VESICULAR-FUSION PROTEIN NSF 62 744 IPR039812 GO:0016887|GO:0035494
Pvu2g2355 744 CDD AAA 527 653 - -
Pvu2g2355 744 Gene3D - 399 486 - -
Pvu2g2355 744 Pfam ATPase family associated with various cellular activities (AAA) 257 397 IPR003959 GO:0005524|GO:0016887
Pvu2g2355 744 Pfam ATPase family associated with various cellular activities (AAA) 538 652 IPR003959 GO:0005524|GO:0016887
Pvu2g2355 744 CDD AAA 255 398 - -
Pvu2g2355 744 SMART AAA_5 253 400 IPR003593 -
Pvu2g2355 744 SMART AAA_5 533 671 IPR003593 -
Pvu2g2355 744 SUPERFAMILY ADC-like 12 96 IPR009010 -
Pvu2g2355 744 SUPERFAMILY Cdc48 domain 2-like 99 202 IPR029067 -
Pvu2g2355 744 Gene3D - 495 666 IPR027417 -
Pvu2g2355 744 Gene3D - 207 398 IPR027417 -
Pvu2g2355 744 Pfam AAA+ lid domain 424 479 IPR041569 -
Pvu2g2355 744 Gene3D - 100 197 - -
Pvu2g2355 744 Gene3D - 13 96 - -
Pvu2g2355 744 Pfam Cell division protein 48 (CDC48), domain 2 122 176 IPR004201 -
Pvu2g2355 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 496 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2355 Pvu-Chr2 39326664 39338521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2355 248 464 Calmodulin-binding Proteins AT3G56690 38.914 2.81e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2355 K06027 - gmx:100779259 1349.73