Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2318 ATGGCTTCGGAGATTGAAATTTCTCCGGCCGACACTCGCAAGGCTCCCGGCAAGGACCAACAAGCTGCCGGCGTCGGAATCCTTCTGCAGATCATGATGCTCGTCCTGTCCTTCGTCCTCGGCCACGTTCTCCGTCGCAAGAAGGTTTACATCATCCCCGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGCATTCTGGCAAACATTTCAGACACCGAGACTAGTATCAGGGCGTGGTTCAATTTTCACGAGGAGTTTTTCTTCCTGTTCTTGCTACCTCCTATCATATTTCAGTCTGGGTTCAGTCTCGCACCTAAACCATTTTTCTCGAATTTTGGAGCAATTGTCACATTTGCTATCCTCGGCACCTTTATAGCTTCAATTGTTACGGGTATCTTGGTTTATCTTGGTGGTGTGCTCTTTCTAATGTATAAGCTACCTTTCGTAGAGTGCCTGATGTTTGGTGCTCTTATATCAGCTACTGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTGGGCACTGATGTCAATCTATACGCCTTGGTTTTTGGGGAATCTGTTTTGAATGATGCAATGGCTATTTCTTTGTACAGGACAATGTCATCTGTTAAAGCTGATCCATCTGGACAAAATTTATTCATGGTGGTTGTTCGGTTTTTGGAGACTTTTGTAGGGTCAATGTCAGCAGGTGTTGGAGTTGGATTTATATCTGCTTTGCTATTTAAGTATGCAGGATTAGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTATTTGTCCTTTTCCCATATTTCTCGTACATGCTTGCTGAAGGCCTTGGTCTGTCTGGTATTGTATCAATACTGTTCACTGGAATAGTCATGAAGCATTATGCATATTCCAATTTGTCACAAAGTTCTCAAAGATTTGCATCAGCCTTTTTCGAGTTGATATCATCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTTATCGGAATTGCAAGGGCTGCAAATGTCTTCTCTTGTGCTTATTTGGTAAATGTGGTCAGACCCAGTCATCGAAGGATACCTCCAAAATATCAGAAGGCACTTTGGTATAGTGGACTTCGAGGTGCAATGGCTTTTGCGCTTGCTCTGCAATCCGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTTACTGCAACTACTGCAATAGTTGTTTTGACGGTATTGCTAATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTTGTAGGTGGTGATGACGATAGCCCTTTGGCTTCAGTTGGTACTGTCACAAATTTTGATGGAAGAAATGGTTATATTGCTCCTCCTTACAATGAAGAGTCATCTTCAGGGAACAAAATCAAGATGAAGCTAAAAGAATTGCACAAGAGTGCTGCATCTTTTACAGCAATTGATAAAAACTACCTCACCCCATTCTTTACTAGTCAAAATGGAGATGAAGACGACGAAGCGGAGCCTTTTACTTCTACAAGATCGGGATTTCATGGGCAGAGCCCCTATTCGTCATGA 1605 0.4224 MASEIEISPADTRKAPGKDQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYIIPEASASLLIGLIVGILANISDTETSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAILGTFIASIVTGILVYLGGVLFLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSSVKADPSGQNLFMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFASAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNVVRPSHRRIPPKYQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDDDSPLASVGTVTNFDGRNGYIAPPYNEESSSGNKIKMKLKELHKSAASFTAIDKNYLTPFFTSQNGDEDDEAEPFTSTRSGFHGQSPYSS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2318 534 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu2g2318 534 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu2g2318 534 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu2g2318 534 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu2g2318 534 MobiDBLite consensus disorder prediction 506 534 - -
Pvu2g2318 534 Gene3D - 150 202 - -
Pvu2g2318 534 PANTHER SODIUM/HYDROGEN EXCHANGER 14 517 IPR018422 GO:0006812|GO:0015299|GO:0016021
Pvu2g2318 534 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu2g2318 534 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 31 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu2g2318 534 PANTHER SODIUM/HYDROGEN EXCHANGER 6 14 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2318 Pvu-Chr2 39012261 39023902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2318 12 438 Antiporters AT5G55470 32.450 1.53e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2318 K14724 - gmx:100790830 944.11