Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g2316 | ATGGACAGCACCGATTCATCATCAGCGTCTCAGCACCCACACCTCCCTCCGGGCTTTCGCTTCCACCCCACCGACGAAGAACTCGTCGTTCACTACCTCAAGAGAAAAGCTTCTTCTACACCCCTTCCCGTCGCCATCATCGCCGACGTTGATCTCTACAAGTTCGACCCCTGGGAGCTCCCAAGTAAAGCAACTTTTGGTGAACAAGAGTGGTACTTTTTCAGTCCAAGGGATCGGAAGTACCCAAATGGGGTGAGACCCAACAGAGCTGCTACTTCTGGGTATTGGAAGGCCACGGGAACTGACAAGCCAATACTAACATCTGATGGGCACCAGAAAGTTGGAGTTAAGAAAGCACTTGTTTTCTACGGTGGAAAGCCTCCAAAAGGGGTTAAAACCAATTGGATCATGCATGAGTATAGGCTTGTTCATGATTCCTTTAACTCGACCTCAAAACCCCCTCCTCTTGTTCCTCCAAACAAGAAAAATTCCCTCAGGCTGGATAATTGGGTTTTGTGTCGAATATACAAGAAAAGCAACAGCAGCATCCTAACAAGGCCACCCTTGATGGAGCAAGGAGAGGAGCTTTCAATGGAGAACATGCTTCCAACGATGTCAACTTTGTCAATGGCTAATAATAATACTCAAAATTCAAAACCTCAATCTTCGAGAGGTACGAGCTATGGACCACTGGGACTTGAAAATGATGACAACTTCTTCGATGGAATCTTAGCCGTTGATCATCAGAGCATGCAAAGTGGTTCTGATTCTCACCTTTTCTCTCCAAACTCAAAGGGTGGCAACTTTCCTATGAAACGTGCACTCACATCACAGCAACTTTGGAACGAGACAGGGTCTCCGGGGTCATCTTCTTCATGTAAGCGATTCCATGGTGATCTTAACAGTGGAACTGAGGACAACGATTCCTTTGTTTCCTTGCTTAGCCAGTTTCCTCAGAACGCAACTTTTCAACCAAACGCGATTCATGGGTCCGTTGGGGATGGTGCGCAGAGACAGCAACAGTTTCAGCTTCCTGGTATAAATTGGAACTGA | 1053 | 0.4682 | MDSTDSSSASQHPHLPPGFRFHPTDEELVVHYLKRKASSTPLPVAIIADVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPILTSDGHQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLVHDSFNSTSKPPPLVPPNKKNSLRLDNWVLCRIYKKSNSSILTRPPLMEQGEELSMENMLPTMSTLSMANNNTQNSKPQSSRGTSYGPLGLENDDNFFDGILAVDHQSMQSGSDSHLFSPNSKGGNFPMKRALTSQQLWNETGSPGSSSSCKRFHGDLNSGTEDNDSFVSLLSQFPQNATFQPNAIHGSVGDGAQRQQQFQLPGINWN* | 351 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g2316 | 350 | MobiDBLite | consensus disorder prediction | 282 | 301 | - | - | |
Pvu2g2316 | 350 | Pfam | No apical meristem (NAM) protein | 16 | 142 | IPR003441 | GO:0003677|GO:0006355 | |
Pvu2g2316 | 350 | MobiDBLite | consensus disorder prediction | 209 | 231 | - | - | |
Pvu2g2316 | 350 | PANTHER | NAC TRANSCRIPTION FACTOR-LIKE PROTEIN | 1 | 304 | - | - | |
Pvu2g2316 | 350 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Pvu2g2316 | 350 | SUPERFAMILY | NAC domain | 8 | 178 | IPR036093 | GO:0003677|GO:0006355 | |
Pvu2g2316 | 350 | Gene3D | NAC domain | 24 | 182 | IPR036093 | GO:0003677|GO:0006355 | |
Pvu2g2316 | 350 | MobiDBLite | consensus disorder prediction | 209 | 229 | - | - | |
Pvu2g2316 | 350 | MobiDBLite | consensus disorder prediction | 327 | 350 | - | - | |
Pvu2g2316 | 350 | ProSiteProfiles | NAC domain profile. | 15 | 178 | IPR003441 | GO:0003677|GO:0006355 | |
Pvu2g2316 | 350 | PANTHER | NAC TRANSCRIPTION FACTOR 56 | 1 | 304 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g2316 | Pvu-Chr2 | 38979449 | 38981396 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g2316 | 5 | 350 | NAC Transcription Factor Family | AT1G61110 | 54.342 | 2.95e-112 | 328 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Pvu2g2316 | NAM | 9.6e-40 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g2316 | - | - | gmx:100797132 | 607.446 |