Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2315 ATGAGCTTCCATAATATGGATAACATTGTATTAAAGCTGACTAGTTTATACACCCTGTTGGTGCTTTTACTTTTTCTATCTTATAAGCCTGCTCTTTCATTTGCTACTAGGCATAGCCAATATTGGGGTGGTGGCAGGACATTGAGCTCTGGTTATAATGGTGATCTTGTCACTAACTTGCCTGGCCAGCCTAAGGTAAATTTCCAGCACTATGCTGGATATGTCACAGTCAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTCTATGAGGCTATGAACAAGCCAGAAGAGAAACCATTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATACGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACTGATGGCCAGGGCCTCAAATTTAATAACTTCTCATGGAACAGAGAAGCCAGCATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCATACTCAAATACAAGCAGTGACTATGACCAATTGGGAGATGATTTAACAGCTAACGATGCTTACTCCTTTCTTCGCAATTGGTTCCAAAAGTTTCCATCATACAGAACGAGGCCATTTTACATAGCAGGGGAGAGCTATGCAGGAAAGTATGTACCAGAGCTGGCTGAACTCATCCATGATAGGAACAAGGACCCCTCTCTCTATATTGATCTCAAGGGTATTCTGTTGGGTAACCCTGAAACATCTGATGCTGAGGATTGGATGGGCCTGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTCATAAAATAATCAAGACAAGTTGTGACTTTAACAGCAGTGATCCATGGCGTAACCAAGATTGTAGTCAAGCTGTGGATGAAGTACTCAAACAATACAACGAAATTGATATCTACAGTCTCTACACCTCTGTCTGCTTTGCCAGTACAGCACGTTCAGACGATCAATCCATGCAAACTTCCATGAAGCTTACATCTAAAATGATGCCTAGGATGTTGGGTGGCTATGATCCATGCCTTGATGACTATGCTAAAGCTTTTTATAATAAACCAGATGTTCAGAAGGCTCTTCATGCCAGTGATGGTCACAATCTAAAGAATTGGAGCATTTGCAACAACAAGATATTCAATGACTGGGCCGATTCAAAGCCATCTGTCATCCCAATTTACAAGAAACTTATTTCAGCAGGACTTAGGATTTGGGTTTACAGTGGAGACACAGATGGTAGAGTACCAGTGTTGTCCACAAGATATAGCTTAAGCTCTCTTGCCTTGCCTGTCACTAAATCATGGAGGCCTTGGTACCATGAAAACGAGGTTAGTGGATGGTTTGAAGAATACGAGGGGCTAACATTTGCAACGTTTCGAGGAGCTGGGCATGCAGTTCCCTGTTTTAAACCAAGCAATTCACTTGCGTTCTTCACTTCCTTTCTCAATGGAGAATCACCACCTTCTACAAAATAA 1470 0.4238 MSFHNMDNIVLKLTSLYTLLVLLLFLSYKPALSFATRHSQYWGGGRTLSSGYNGDLVTNLPGQPKVNFQHYAGYVTVNETNGRALFYWFYEAMNKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGQGLKFNNFSWNREASMLFLESPVGVGFSYSNTSSDYDQLGDDLTANDAYSFLRNWFQKFPSYRTRPFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHKIIKTSCDFNSSDPWRNQDCSQAVDEVLKQYNEIDIYSLYTSVCFASTARSDDQSMQTSMKLTSKMMPRMLGGYDPCLDDYAKAFYNKPDVQKALHASDGHNLKNWSICNNKIFNDWADSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLALPVTKSWRPWYHENEVSGWFEEYEGLTFATFRGAGHAVPCFKPSNSLAFFTSFLNGESPPSTK* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2315 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 486 IPR001563 GO:0004185|GO:0006508
Pvu2g2315 489 Gene3D - 341 377 - -
Pvu2g2315 489 Gene3D - 388 482 - -
Pvu2g2315 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Pvu2g2315 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Pvu2g2315 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 211 IPR001563 GO:0004185|GO:0006508
Pvu2g2315 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Pvu2g2315 489 Pfam Serine carboxypeptidase 61 482 IPR001563 GO:0004185|GO:0006508
Pvu2g2315 489 Gene3D alpha/beta hydrolase 52 310 IPR029058 -
Pvu2g2315 489 ProSitePatterns Serine carboxypeptidases, serine active site. 200 207 IPR018202 GO:0004185
Pvu2g2315 489 PANTHER CARBOXYPEPTIDASE 15 486 - -
Pvu2g2315 489 SUPERFAMILY alpha/beta-Hydrolases 55 483 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2315 Pvu-Chr2 38968965 38973066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2315 346 483 Calmodulin-binding Proteins AT2G22960 34.532 1.25e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2315 K16297 - gmx:100815993 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2315 2 38968965 38973066 Pvu6g1961 6 29715243 29718979 PCT