Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2309 ATGGGTTGCTGGAATTCAGACTTGAATTTGCAAATTTTCATCTTTTCAATGTTGACTTTCAGTGCAACTTTCTGTGTTGGGGACACTGATCCACTTGATGTTGCGGCAATCAATAGTTTGTATGTGGCTCTTGGCTCACCACCCCTCGAGGGGTGGAAAGCCTTAGGAGGAGATCCATGCTTGGAACAATGGGAAGGTGTGAGTTGTGTCTTCTCCAACATAACTGCTTTGCGACTGGGAGGCATGAGTTTAAGTGGACAACTGGGAAGTAATTTGGATTTCCCATCCATCATAGAATTGGATCTTAGCAACAACCATATTGGAGGGGCCATTCCATCCACTTTGTCCCCTACTTTAAAGAACTTGTCACTCGCAGCTAATCAATTAAATGGAAGCATTCCGGATGCCTTGTCCTCATTAACTCAATTGTCAGACTTGTCATTAAAAGATAACCATCTGAACGGACAAATTCCAGATGCATTTCTACAATTCACTGGTTTGTTGAATATGGATCTGTCTGGCAACAACTTGAGTGGTCAGCTGCCTCCCTCAATGGGGAATTTGTCATCTCTTATCACATTACATTTGCAGAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAATATAGAGAACAATATATTCTCTGGGCCAATTCCTCCAGAGTTGTTGAGTATCCCCAATTTCAGAAAAGATGGGAATCCGTTTAATACTACTATCATTCCATCACCTCCGGCTGCTTCCCCTGCTCCTGTTGCTATGTCTCCTTCCCCAGAAATATCACCTTGGAAAGTGGCAAATAATCCCTCTGCTACCACCTTAAAAGCACCAATACCTGCAATTGCTGAGAGGTCTTTCAGAACTAAGAAATTAGTTTGGATTGCTGGTGCAGGCTTTTTAATATTTATTGCATTAGGAGTTTGTCTTCTAATTTTGTGGTGCTTTAAGAGAAGACCAGAGAACAAGAGTTATAAGAAACACAACATGAATGTGTATAGAAGATCTTTGCATAAACGTACAAGCAGTGAGTCCACTTTTGAAGCAACTGATGACGAGGAGAAAGGATGGGATTCAAAACTTCCACCCTTGCAGCCAGCACCACCATATCAACTCCCAATCATTCCTGAAGAGAATTTAATCATTAATCCAGCTATATTTGGTAAAGCAACCAAAAGACAAATTGTAACAAATTCCATCAAAGTTTATACTGTTGCATCACTTCAGCAGTACACAAATAGTTTTTCCCAAGAAAATTATATTGGGGAAGGCATGCTTGGCCCTGTTTATAGGGCTGAACTCCCTGATGGAAAGTTACTGGGAGTTAGAAAGCTGAATGCTACTGCATCTATGGGGCAAAATCACGAACAGTTTCTTCAATTAGTTTCCAGTGTCTCCAAAATTCAACATGCTAATATTGTAAAGCTTATGGGCTACTGTGCCGAGTATAGCATACACCTACTTGTATATGAGTATTGCAGTAATGGCACCCTTCATGATGCATTGCATACAGATGATAAACTTCGGATTAACCTTTCATGGGATGATCGCATTAAAGTGTCACTTGGAGCGGCAAGAGCTTTAGAGTATTTGCATGAGTACTTTCAGCCACCTATTGTGCACCGAAACTTTACATCTGCTAATGTACTCCTCAATGACAAGTTGGAAGTGCAGGTCTCTGATTGTGGATTAGGTTCTTTACTGTCTTCAGGCTTTGCTAGTCAGTTGACGGGGCACCAACTCACAGCTCATGGTTACAGTGCTCCAGAATATAACAATGGAAGTTATACACTGCAAAGTGATGTCTTTAGCTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTATGACAGCTCACTGCCTCGTGCAGAGCAGTTTTTGGTGAGATGGGCAATCCCTCAACTCCATGACATAGATGCATTGTCAAAAATGGTTGACCCCTCTTTAAAGGGAGAATATCCTAAGAAATCCTTGTCACGTTTTGCAGACATTATTTCTTCATGTATACAGCATGAACCTGAATTTCGACCAGCAATGTCAGAAATTGTTCAGGATCTCTTGCGAATGATGTAG 2103 0.4142 MGCWNSDLNLQIFIFSMLTFSATFCVGDTDPLDVAAINSLYVALGSPPLEGWKALGGDPCLEQWEGVSCVFSNITALRLGGMSLSGQLGSNLDFPSIIELDLSNNHIGGAIPSTLSPTLKNLSLAANQLNGSIPDALSSLTQLSDLSLKDNHLNGQIPDAFLQFTGLLNMDLSGNNLSGQLPPSMGNLSSLITLHLQNNQLSGTLFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPSPPAASPAPVAMSPSPEISPWKVANNPSATTLKAPIPAIAERSFRTKKLVWIAGAGFLIFIALGVCLLILWCFKRRPENKSYKKHNMNVYRRSLHKRTSSESTFEATDDEEKGWDSKLPPLQPAPPYQLPIIPEENLIINPAIFGKATKRQIVTNSIKVYTVASLQQYTNSFSQENYIGEGMLGPVYRAELPDGKLLGVRKLNATASMGQNHEQFLQLVSSVSKIQHANIVKLMGYCAEYSIHLLVYEYCSNGTLHDALHTDDKLRINLSWDDRIKVSLGAARALEYLHEYFQPPIVHRNFTSANVLLNDKLEVQVSDCGLGSLLSSGFASQLTGHQLTAHGYSAPEYNNGSYTLQSDVFSFGVVMLELLTGRKSYDSSLPRAEQFLVRWAIPQLHDIDALSKMVDPSLKGEYPKKSLSRFADIISSCIQHEPEFRPAMSEIVQDLLRMM* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2309 700 MobiDBLite consensus disorder prediction 350 369 - -
Pvu2g2309 700 Gene3D Phosphorylase Kinase; domain 1 391 499 - -
Pvu2g2309 700 Gene3D Transferase(Phosphotransferase) domain 1 500 700 - -
Pvu2g2309 700 Gene3D Ribonuclease Inhibitor 34 251 IPR032675 -
Pvu2g2309 700 MobiDBLite consensus disorder prediction 350 366 - -
Pvu2g2309 700 SUPERFAMILY L domain-like 36 236 - -
Pvu2g2309 700 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 7 343 - -
Pvu2g2309 700 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 395 700 - -
Pvu2g2309 700 Pfam Protein tyrosine and serine/threonine kinase 425 696 IPR001245 GO:0004672|GO:0006468
Pvu2g2309 700 PANTHER LEUCINE RICH REPEAT KINASE 2 7 343 - -
Pvu2g2309 700 PANTHER LEUCINE RICH REPEAT KINASE 2 395 700 - -
Pvu2g2309 700 ProSiteProfiles Protein kinase domain profile. 422 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2309 700 SUPERFAMILY Protein kinase-like (PK-like) 403 696 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2309 Pvu-Chr2 38880608 38888228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2309 23 700 Strubbelig Receptor Gene Family AT4G03390 51.015 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pvu2g2309 PK_Tyr_Ser-Thr 3.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2309 - - pvu:PHAVU_002G224200g 1338.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2309 2 38880608 38888228 Pvu6g1968 6 29772962 29779732 PCT