Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2279 ATGGTTGATGGAGAAGAATTCGCCGGAGCTTCGGGTCTGCGGCGAGTGGTAGAGCTCATTCTTGCCGTGCTCTCTCTCTCGCATTCGATTCGTGTCTTCGCCGGAAAATGGCAACTTATTCGCAACAAGCTGGAGGAGCTTCATGGCGGTTTAGTCGCCGCCGAAAACTGCGACTCCGGCGAGAGCCCGTCGCTTTCGAGGCTGGTGACGGCGGTGGCGGCCACTGCGACGGAGTGCCACGATCTGTGTCGGCGCTGCGTGGATGTTTCCTACAGCGGGAAGCTTCTGATGCAGAGCGATTTGGACGTGGCGTTCGCGAAGCTCGATGCGCACGCGAGGAAGCTGTCTGAGATATACAAAAGGGGGATTTTAACAAATGGGTTTGCGCTCGTTGTGTCAAAGCCGAGTCTTGGGGCTTCGAAAGAGGACATGAGGTTCTACGTGAGGGACTTGACGACGAGGATGAAGGTTGGAGATTTGGGGATGAAACGACAGGCGTTGCGGAACCTTCTAGAAGTTGTGTTGGAGGATGAGAAATATGTGAAGGTGATTGTTGACGTGGCTGAAGTGGTTCATTTGTTGGTGGGGTTTTTGGGTTCTATCGAGGTGGAAATCCAGGAGGAGAGCACTAAGGTGGTTTCTGTGGTTGCTGGGTTTGATTCTTACAAAGGGGTTTTGGTTGGGGCGGGGGTGATTGCTCCTTTGATTAAGGTTCTGGATTGTGGGAGTGATTTGGGGAAGGTTGCGGCTGCAAGGTGTTTGGTGAAGTTGACTGAGAATTCGGACAATGCTTGGTGTGTTTCGGCTCATGGGGGTGTCAGCGTGTTGTTGAAGATTTGTGGTGTTGCTGATTGTGGAGGTGATTTGGTCGCACCTACTTGTGGGGTGTTGAGGAATCTCGTTGGTGTTGAGGAAATTAAGAGGTTTATGATTGATGAGGGTGCTGTGTTAACTTTCATTAAGCTTGTGAGGTCCAAGGAGGAAGCGATTCAGGTGAATTCGATTGGATTTATTTTGACTATCGCCTCTGGGGATGAGTTGGTTAGGCAGATGGTGATCAGAGAGGGAGGGATTCGTGCTTTGTTGCGTATTTTGGATCCGAAGTGGTCTTATTCTTGTAAAACCAGGGAGGTAGCAATGAGGGCCGTTGAGGATTTGTGTTTTAGTTCACCTAGTTCTGTGGGTATTTTGATGAGTTACGGCTTTGTAGATCAGCTGACATACTATATTCGAAATGGGGAGGTTTCGATTCAGGAGTTGGCATTGAAAGTGGCGTTTAGGTTGTGTGGAACATCTGAGGAGGCTAAGAAAGCAATGGGGGACGCAGGGTTTATGCCAGAGTTTGTTAAGTTTCTGAATGCAAAGTCCTTTGAGGTTCGAGAAATGGCAGCTGAGGCACTCTCTGGCATGGTTATGGTGCCTAGAAATAGAAAGAGATTCGTGCAGGATGACCATAATATTGCCCTTCTTCTGCAGTTGCTTGATCCAGAGGAGGGGAATTCTGGTAATAAAAAGTTCTTAATATCTATATTAATGTCCTTAACAAGTTGCACTAGTGGGAGGAAAAAGATTGTTAGTTCCGGATATGCCAAAAACATAGAAAAACTTGCGGACGCTGAAGTTTCTTCTGACGCAAAGAGACTTGTGAAGAAGCTATCCACTAACCGGTTCCGCAGTATGTTGAGTGGAATCTGGCACTCATGA 1704 0.4836 MVDGEEFAGASGLRRVVELILAVLSLSHSIRVFAGKWQLIRNKLEELHGGLVAAENCDSGESPSLSRLVTAVAATATECHDLCRRCVDVSYSGKLLMQSDLDVAFAKLDAHARKLSEIYKRGILTNGFALVVSKPSLGASKEDMRFYVRDLTTRMKVGDLGMKRQALRNLLEVVLEDEKYVKVIVDVAEVVHLLVGFLGSIEVEIQEESTKVVSVVAGFDSYKGVLVGAGVIAPLIKVLDCGSDLGKVAAARCLVKLTENSDNAWCVSAHGGVSVLLKICGVADCGGDLVAPTCGVLRNLVGVEEIKRFMIDEGAVLTFIKLVRSKEEAIQVNSIGFILTIASGDELVRQMVIREGGIRALLRILDPKWSYSCKTREVAMRAVEDLCFSSPSSVGILMSYGFVDQLTYYIRNGEVSIQELALKVAFRLCGTSEEAKKAMGDAGFMPEFVKFLNAKSFEVREMAAEALSGMVMVPRNRKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCTSGRKKIVSSGYAKNIEKLADAEVSSDAKRLVKKLSTNRFRSMLSGIWHS* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2279 567 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 271 315 IPR000225 GO:0005515
Pvu2g2279 567 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 567 - -
Pvu2g2279 567 Gene3D - 147 556 IPR011989 -
Pvu2g2279 567 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 567 - -
Pvu2g2279 567 Pfam Armadillo/beta-catenin-like repeat 433 468 IPR000225 GO:0005515
Pvu2g2279 567 SUPERFAMILY ARM repeat 154 548 IPR016024 -
Pvu2g2279 567 SMART arm_5 432 472 IPR000225 GO:0005515
Pvu2g2279 567 SMART arm_5 345 388 IPR000225 GO:0005515
Pvu2g2279 567 SMART arm_5 219 259 IPR000225 GO:0005515
Pvu2g2279 567 SMART arm_5 303 343 IPR000225 GO:0005515
Pvu2g2279 567 SMART arm_5 177 218 IPR000225 GO:0005515
Pvu2g2279 567 SMART arm_5 260 302 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2279 Pvu-Chr2 38528587 38531172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2279 131 380 U-box Gene Family AT2G23140 21.724 1.01e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2279 - - gmx:100809382 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2279 2 38528587 38531172 Pvu6g1995 6 29989885 29991808 PCT