Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2272 ATGACGTCACACTCTCACTACCAACCTGATTTAGACGCCGACTCCGTCACCTCTTCCCCTCGCTCCGACCATTTCCACGACGCGCCGCCTCGCGTCCGCTTCATGTGCAGCTTTGGCGGCAAGATCCTCCCCCGCCCCCATGACAACCAGCTCCGTTATGTCGGCGGCGACACTCGAATCGTGGCCGTCCACCGCTCCATCTCCTTCTCCACCCTCATTCTCAAACTCTCCAAACTCTCAGGCATGGCCAATATAACCGCGAAGTACCAGCTCCCGAACGAGGATCTGGACGCGTTGATCTCGGTCACGACTGACGAAGACGTGGAGAACATGATGGACGAGTACGACCGCGTCGCACAGAACCAGAACCCGCGATCGGCGCGGCTTCGGCTCTTCCTCTTTCCCGAAGGCGAGGACTCTCGAACCAGTAGCATCAGCTCGCTATTGAACGGCTCAGCCAAACGCGAGAACTGGTTCCTCGACGCACTAAACGGCGGCGTTTCTGGTCTCGAGCGTGGCCGCTCTGAAGCATCTTCCATGGTCTCGGAAGTACCTGATTACCTTTTCGGATTAGACAACTCAGAAGAAACTCACCAACGCGACCCACGACCCAAGGATCGACCCGTGCTCCAAGATAACGTCTCAGTTTCGGATCCGGGTTCCCCCGCCCCGGTTGTTTCCTCCCCATACTGTTCCACCTCATCAGCGCCCTGCGTGCCTTCTCTTCCCAACCTTCCCCCAGTAAAGACTAAACTTTCGAACCCTGTTCCTGATTCGGACTTCAAGGAAAGTCCAATCGAACCTGAAACGGAACCTCAACCGAACCTCAACCACAATCTCTACCCGGGTAACCCTGTAATTCACTATCCCCAAGAACCTGCTTATTCTGCTCATTCAGTAAATCCGGTTCCTGTTTACTACGTTCCCAGTCCGGTTCGACCGGGAACTGTGCCGGTTCCTTTGCAGCAGACACCTTACCCCTACGTTCAACAACCTTACCATGCAGTGATGCCATCTCAGGTTCCCATCGGCTACCATCATTTGATTCCGGGTTCGGGTCAAGTATATGGTGCAGGCGTGAGGCAGGTGAGTCCACTGCAACCTTACAATCCTTCCGCCGCAGTGGTTCACGACGGTTTCAAACAGCACATGTATCAAGCCGTGCCGAACTCCGGTCCGGTTCCCCTTCACCCGATGATGCCGATGACTGGTGCTGATGAACCCAAGAGAGGTGGAGCGGAGTATGTAGTGGGTCGGGGCCCCAATTCCCTGAATAACTGA 1281 0.5566 MTSHSHYQPDLDADSVTSSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVHRSISFSTLILKLSKLSGMANITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNQNPRSARLRLFLFPEGEDSRTSSISSLLNGSAKRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEETHQRDPRPKDRPVLQDNVSVSDPGSPAPVVSSPYCSTSSAPCVPSLPNLPPVKTKLSNPVPDSDFKESPIEPETEPQPNLNHNLYPGNPVIHYPQEPAYSAHSVNPVPVYYVPSPVRPGTVPVPLQQTPYPYVQQPYHAVMPSQVPIGYHHLIPGSGQVYGAGVRQVSPLQPYNPSAAVVHDGFKQHMYQAVPNSGPVPLHPMMPMTGADEPKRGGAEYVVGRGPNSLNN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2272 426 MobiDBLite consensus disorder prediction 194 208 - -
Pvu2g2272 426 MobiDBLite consensus disorder prediction 194 230 - -
Pvu2g2272 426 MobiDBLite consensus disorder prediction 1 16 - -
Pvu2g2272 426 MobiDBLite consensus disorder prediction 244 276 - -
Pvu2g2272 426 Gene3D - 52 135 - -
Pvu2g2272 426 MobiDBLite consensus disorder prediction 214 230 - -
Pvu2g2272 426 MobiDBLite consensus disorder prediction 1 28 - -
Pvu2g2272 426 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 420 - -
Pvu2g2272 426 PANTHER OS05G0427100 PROTEIN-RELATED 5 420 - -
Pvu2g2272 426 CDD PB1_UP2 35 134 - -
Pvu2g2272 426 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Pvu2g2272 426 SUPERFAMILY CAD & PB1 domains 47 143 - -
Pvu2g2272 426 SMART PB1_new 46 136 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2272 Pvu-Chr2 38422518 38424248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2272 26 171 MAP Kinase Kinase Kinase AT5G57610 46.622 2.84e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2272 - - gmx:100806717 699.123