Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2270 ATGACCACTGTAGCCAAATATACAGATTTTCTGCTCCTTCTAATCTTTCTCTTCTCTTTTCATACCTTCTTCTCTCATGCTGCCAATTCCCTAACAGGAGAGACAGAAATCAAAGACAATAATGGTGTTGACAATTTGGTGTCAGAAAATCTCACCTTTGAAATGGGTTTCTTTGGTTTTGATAACTCTTCAAGATACGTTGGGATTTGGTACCACAAGTTTCCTAGTTCAGCTTCAGCATTCATATGGGTAGCGAATAGAGAGAAACCCATCAACGGAAGAGGAGGTTCCATCAAAATCAAAGGTGACGGAAACTTGGTTGTTCTCGATGGAGAGAACAACGAGGTGTGGTCAACTAACAAGTCATTGTCAAGGAACATCACAAAAGCTGTTCTTCGTGATGATGGGAACCTTGTTCTTTCAGAAGAATCAGAACATGAGAAAGATGTGTGGCAAAGCTTTGAGAACCCAACTGATACTTTCGTGCCAGGTATGTCACTGCCAGCTAGTGCTGGAGTCGGTCTGTTCAGGTCATGGAAATCAGCAACGAATCCCGCACCGGGAAACTACTCAATGGGGGTTGACTCTACGGGATCAACGCTACAGATTTTGATTATGGATGGGGAGAAAAAGAGGTGGAGAAGTGGGTATTGGGATGGTAGAGTATTCGTTGGTGTCTCCAATATGACTGGAAGCTCTCTTTTTGGTTTTAAATTGAATGGGGATAACTTTACATATACATGGAATGGCCCTGAAAAGGTGAGGTTTCAGATAACTTGGGATGGGTTTGAAAAGAAGTTCGTATCGGATGAAGATCAACAACAATGGAATAATACACAACATGAGCCTTATAATAAGTGTGAGACTTATAATTTTTGTGGCAATTTTGCATTGTGTGATATCTCTAAGGCAGATGTTTGTAGTTGCATGCAAGGGTTTCAAGGAGGCGAGTGGAATGGGGGAAATTCAGGGGGTTGTAAGAGGAGGACTCTACTGAAGGCTGAGAGAAATAGTTCTGGAACTGAGGTTAGTGTTGGTGAAGATGATTTCTACGTTCAAAGGTGTACAAAGTTGCCAGATTTTGCACGTTTGGAGAGTCCTTCTGACGATGGGGATTGTCAACGGTTTTGTCTGCAGAATAGTTCTTGTACTGCGTATTCATATACGATTGGAATTGGGTGCATGATTTGGTATGTGGACTTAGTTGATATTCAACACACTGAAAATAGTATTGGAAATGTACTCAACATCCGTCTTGCTGATTCTGAGTTTGAAGCAGTCGATGGGGAGAAAAAGACCAAAATTTGGATAATAATAGTACCTGTTGTGGTTGGGCTGATCTGCCTTGGAATCTTTGTATTGCTGGTATGGAGGTTTAAGAGAAAACGTAAAGTTTCCTCAGCTTCTGCTAATAACAATGGTGATTTTCCAGTCATTGATCTAACGAGGAGTACAGACTTATCAGCAGAATTTTCAGGATCAACTGAGTTAGGTTTGGAAGGGAATAATGCAGAACTTCCATTGTTCACTTTTAGTTTCATTGCAGCAGCAACAGACAATTTCTCCCAAAAAAATAAGCTGGGACAAGGGGGATTTGGTCCGGTATACTGGGGGAACCTTCCAGGAGGAGAGGAAGTAGCTGTTAAGAGGCTTTCAAGAAAGTCTAGTCAAGGCTTAGAGGAGTTCAAGAATGAAATGATGCTAATAGCCAAACTGCAACATAGAAATCTGGTTAGACTATTGGGATGTTCCATTCAGGGAGAAGAAAAAATTCTGGTATATGAGTACTTGCCAAACAAAAGCTTGGACTGTTTTTTATTTGATCCGGTGAAGCAAACACAACTAGACTGGACAAAGCGCTTTGAAATAATTGAAGGCATTGCAAGAGGGCTGCTTTACCTGCACCAGGATTCAAGACTACGAATCATTCATCGGGATCTAAAAGCAAGCAACATTTTATTAGATGAAAACATGAATCCAAAAATTTCAGACTTTGGCTTAGCCAGAATATTTGGAGGAAACCAAAATGAAGCCAACACAAACAGAGTGGTTGGTACATATGGCTATATGGCGCCAGAATATGCAATGGAAGGTCTATTTTCAGTTAAATCTGATGTCTATAGTTTTGGTGTATTGCTACTAGAGATTATGAGTGGGCGCAGGAACACTAGCTTTCGCAACACAGACGATTCAAGTCTCATAGGATATGCCTGGCACCTTTGGAGTGAGCAGAGAGTAATGGAGCTTCTTGATTCTTCCATTGGTGATTCAACTCCAAAGAGTAAAGCATTGAGATACATACACATAGCGATGTTATGCGTGCAAGATTCAGCATCCCGTAGACCAAATATGGCCTCTGTATTGTTAATGCTGGCAAGTGAAGCCACAACTCTTCCTTTGCCTAAACAACCTTTGCGCACAATTTCCACCAGCAAATTAGATGACCAAGATCAATCTTATAGCGAAGGCCTTGATGTGTCAAATGATTTGACAGCTACAATGGTCACAGGGAGATAG 2517 0.4116 MTTVAKYTDFLLLLIFLFSFHTFFSHAANSLTGETEIKDNNGVDNLVSENLTFEMGFFGFDNSSRYVGIWYHKFPSSASAFIWVANREKPINGRGGSIKIKGDGNLVVLDGENNEVWSTNKSLSRNITKAVLRDDGNLVLSEESEHEKDVWQSFENPTDTFVPGMSLPASAGVGLFRSWKSATNPAPGNYSMGVDSTGSTLQILIMDGEKKRWRSGYWDGRVFVGVSNMTGSSLFGFKLNGDNFTYTWNGPEKVRFQITWDGFEKKFVSDEDQQQWNNTQHEPYNKCETYNFCGNFALCDISKADVCSCMQGFQGGEWNGGNSGGCKRRTLLKAERNSSGTEVSVGEDDFYVQRCTKLPDFARLESPSDDGDCQRFCLQNSSCTAYSYTIGIGCMIWYVDLVDIQHTENSIGNVLNIRLADSEFEAVDGEKKTKIWIIIVPVVVGLICLGIFVLLVWRFKRKRKVSSASANNNGDFPVIDLTRSTDLSAEFSGSTELGLEGNNAELPLFTFSFIAAATDNFSQKNKLGQGGFGPVYWGNLPGGEEVAVKRLSRKSSQGLEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKILVYEYLPNKSLDCFLFDPVKQTQLDWTKRFEIIEGIARGLLYLHQDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIMSGRRNTSFRNTDDSSLIGYAWHLWSEQRVMELLDSSIGDSTPKSKALRYIHIAMLCVQDSASRRPNMASVLLMLASEATTLPLPKQPLRTISTSKLDDQDQSYSEGLDVSNDLTATMVTGR* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2270 838 ProSiteProfiles PAN/Apple domain profile. 345 420 IPR003609 -
Pvu2g2270 838 SMART ntp_6 345 419 IPR003609 -
Pvu2g2270 838 Gene3D Phosphorylase Kinase; domain 1 487 596 - -
Pvu2g2270 838 CDD PAN_AP_plant 347 420 - -
Pvu2g2270 838 Pfam S-locus glycoprotein domain 213 314 IPR000858 GO:0048544
Pvu2g2270 838 CDD STKc_IRAK 527 791 - -
Pvu2g2270 838 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 2 838 - -
Pvu2g2270 838 SMART serkin_6 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2270 838 Pfam D-mannose binding lectin 81 174 IPR001480 -
Pvu2g2270 838 PIRSF SRK 1 838 IPR024171 GO:0004674
Pvu2g2270 838 Pfam Protein tyrosine and serine/threonine kinase 523 788 IPR001245 GO:0004672|GO:0006468
Pvu2g2270 838 SUPERFAMILY Protein kinase-like (PK-like) 505 816 IPR011009 -
Pvu2g2270 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 184 IPR036426 -
Pvu2g2270 838 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 838 - -
Pvu2g2270 838 SMART blect_4 37 157 IPR001480 -
Pvu2g2270 838 ProSiteProfiles Protein kinase domain profile. 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2270 838 Gene3D - 22 154 IPR036426 -
Pvu2g2270 838 CDD B_lectin 46 157 IPR001480 -
Pvu2g2270 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Pvu2g2270 838 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Pvu2g2270 838 Gene3D Transferase(Phosphotransferase) domain 1 597 799 - -
Pvu2g2270 838 Pfam PAN-like domain 346 404 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2270 Pvu-Chr2 38407547 38411168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2270 509 822 Receptor kinase-like Gene Family AT4G11530 61.709 1.27e-132 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g2270 PK_Tyr_Ser-Thr 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2270 - - gmx:100786721 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2270 2 38407547 38411168 Pvu6g2016 6 30130648 30134447 PCT
Pvu6g2014 6 30118691 30122328 Pvu2g2270 2 38407547 38411168 PCT