Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2267 ATGGGAGGTTCAACTATTCTCTTCTCATTCTTCCTTTTATGCTTCCCCAAACTTTCCATCTCCACAAACACCTTAACAAAATCTCAATCCCTCCAAACCAACCAAACCCTCCTCTCCCCAAATGCAATTTTCGAGCTGGGTTTCTTTTCCTACACTAATTCCACCTGGTACTTGGCCATATGGTACAAAACCATCCACGACACAGAGAAAACTGTGGTGTGGGTGGCAAATCGTGACACCCCACTTCAAAATTCCATCGGCTTTCTCAAAATTGACGACAAGGGAAACCTCCTCATTGTAAACCAATCCCACAAACCCGTGTGGTCCTCCAACCACTCCACACCAATAACCAACCCAGTTCTTGAGCTCTTGGATTCCGGGAACCTGGTTCTTCGAGAAGAAAACGAGAATGACCCCACAAGGTTTCTCTGGCAGAGCTTTGATTACCCGACAGATACCTTGTTACCCGGCATGAAACTAGGATGGAACTTCGACACGGGCATGGAGAAACACATAACCTCGTGGAGGGTCACAAACCAAGACCCTTCAAGCGGGGATTTTTCCTTCAAGCTAGATTGCCGTGGCCTCCCGGAAATATTCCTCTGGAACAAGGACCAGATAATCTACCGAAGTGGACCTTGGAATGGCGACAGATTCAGCGGGGTACCCGAGATGCAACCCGTCACCGATTCCATTAAGTTCACGTTCTACGCGGATCAGCACCAAGTATACTACACATTCTCAATTGGGAACAACTCCTTGTTCTCAAGACTCTCTGTGAACTCAGTCGGGCAACTCCAACGCCTCACGTGGATACAAAGCACCCAGGTTTGGAACAAATTCTGGTACGCTCCGAAAGACCAATGCGACAACTACCGAGAGTGCGGTGCCTACGGGGTCTGTGACACCAACGCGTCACCGGTGTGTCAGTGTATCACAGGGTTCCGCCCCAGGAACCAGCCGGCGTGGAATTTGCGAGATGGGTCTGAAGGGTGTGTGAGGAAGACGGGATTATCGTGTGGGAGTGACAGGTTTCTGCATATGCAGAGGGTGAAATTGCCAGATACTACGTCGGTGTTCGTGAACAGGAGCATGGGGCTGGTGGAGTGTGGGGATTTGTGCCAGAGGAATTGTTCGTGCACTGCTTATGCCAATATTGAGATTAGGAATGGAGGCAGTGGGTGCGTGATGTGGGTTGGGGAGCTCTTGGACGTTAGAGGCTACCCTTCAGGAGGGCAAGATCTTTATGTCAGATTGGCGGCTTCTGATGTAGGGATAGAAGGTGATTCTGGCAAGACAAGTGATACAATAAGGGATATAGGCATTGTAGTTGGTGTTGCAGGTTTTATACTATTGGCATTGGGTATCTTTATCTTGTGGAAGAAGAGGAAATTGCAACCTATATTGAAAGGGAAGACAGAAAAAAGAGGTTTTTCAGAAAGAAGTCAGGACTTTTTAATAAATGAGGGAGTGTTATCAAGTGACAGAGAACAGTCCGGTGAAAGTAACATGGACGACCTAGAGTTGCCATTGTTTGATTTTAACACCATAACAATGGCTACAAATAACTTCTCTGAAGAAAATAAACTTGGACAAGGAGGCTTTGGTAGTGTTTACAAAGGCAGTTTGAAGGAAGGTCAGCACATTGCTGTGAAGAGATTATCAAAAACTTCTGGCCAAGGAATTGAGGAGTTCAAGAATGAGGTCAAGTTAATTGTCAAGCTTCAACATCGAAATCTAGTTCGTTTGCTTGGTTGCAGCATTCAAATGGATGAGAAGATGCTGGTCTATGAATACATGGAAAATAGAAGCCTTGATGCAATTTTGTTTGATAAGGCAAAAAAATCCTCACTTGACTGGCAAATGCGTTTCAACATTATATGTGGCATTGCTAGAGGGCTTCTATATTTGCACCAAGATTCCAGATTTAGGATCATACATAGAGATCTTAAAGCAAGCAATATTCTACTTGACAAAGAGATGAATCCAAAGATATCAGACTTTGGTATGGCTAGAATTTTTGGAACGGATCAGATAGAAGCAAATACGATGAGAATTGTTGGAACATATGGATACATGTCCCCTGAATATGCTATGGATGGAATCTTTTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTTCTTGTGCTGGAGATAGTAAGTGGAAAGAAAAACAGAGGATTCTATTTGGCAAACAAAGAATTGAACCTTCTAGGACATGCGTGGAAGTTGTGGATAGAAGGAAATGCGTGGGAACTGAGTGATTCGTCTATTGACACTTTAAACTCAGCATCAGAAGTTCAAAGATGCATACAAGTGGGTCTCTTATGCGTGCAAGAGCGCGCAGAAGATAGGCCAACAATGTCTTCAGTGGTCTTGATGCTGAGTAGTGATACTGCATCAATGTCACAACCCAAAAATCCTGGGTTTTGTCTAGGAACGAATCCCATGGAAACTGAATCTTCTTCAAGTAAACAAGAAGAATCATGCACTGTGAACCAAGTCACTGTCACAATGCTAGATGCTAGGTAG 2532 0.4443 MGGSTILFSFFLLCFPKLSISTNTLTKSQSLQTNQTLLSPNAIFELGFFSYTNSTWYLAIWYKTIHDTEKTVVWVANRDTPLQNSIGFLKIDDKGNLLIVNQSHKPVWSSNHSTPITNPVLELLDSGNLVLREENENDPTRFLWQSFDYPTDTLLPGMKLGWNFDTGMEKHITSWRVTNQDPSSGDFSFKLDCRGLPEIFLWNKDQIIYRSGPWNGDRFSGVPEMQPVTDSIKFTFYADQHQVYYTFSIGNNSLFSRLSVNSVGQLQRLTWIQSTQVWNKFWYAPKDQCDNYRECGAYGVCDTNASPVCQCITGFRPRNQPAWNLRDGSEGCVRKTGLSCGSDRFLHMQRVKLPDTTSVFVNRSMGLVECGDLCQRNCSCTAYANIEIRNGGSGCVMWVGELLDVRGYPSGGQDLYVRLAASDVGIEGDSGKTSDTIRDIGIVVGVAGFILLALGIFILWKKRKLQPILKGKTEKRGFSERSQDFLINEGVLSSDREQSGESNMDDLELPLFDFNTITMATNNFSEENKLGQGGFGSVYKGSLKEGQHIAVKRLSKTSGQGIEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDAILFDKAKKSSLDWQMRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQIEANTMRIVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIVSGKKNRGFYLANKELNLLGHAWKLWIEGNAWELSDSSIDTLNSASEVQRCIQVGLLCVQERAEDRPTMSSVVLMLSSDTASMSQPKNPGFCLGTNPMETESSSSKQEESCTVNQVTVTMLDAR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2267 843 ProSiteProfiles Protein kinase domain profile. 524 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2267 843 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Pvu2g2267 843 Pfam D-mannose binding lectin 71 176 IPR001480 -
Pvu2g2267 843 CDD PAN_AP_plant 338 420 - -
Pvu2g2267 843 Pfam Protein tyrosine and serine/threonine kinase 527 793 IPR001245 GO:0004672|GO:0006468
Pvu2g2267 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 216 IPR036426 -
Pvu2g2267 843 SUPERFAMILY Protein kinase-like (PK-like) 509 823 IPR011009 -
Pvu2g2267 843 SMART ntp_6 340 419 IPR003609 -
Pvu2g2267 843 Gene3D Phosphorylase Kinase; domain 1 498 599 - -
Pvu2g2267 843 SMART serkin_6 524 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2267 843 PIRSF SRK 3 843 IPR024171 GO:0004674
Pvu2g2267 843 SMART blect_4 28 150 IPR001480 -
Pvu2g2267 843 Gene3D - 18 147 IPR036426 -
Pvu2g2267 843 CDD STKc_IRAK 530 795 - -
Pvu2g2267 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 842 - -
Pvu2g2267 843 Pfam Domain of unknown function (DUF3403) 797 843 IPR021820 GO:0004674
Pvu2g2267 843 Pfam PAN-like domain 340 405 IPR003609 -
Pvu2g2267 843 ProSiteProfiles PAN/Apple domain profile. 340 420 IPR003609 -
Pvu2g2267 843 Gene3D Transferase(Phosphotransferase) domain 1 600 808 - -
Pvu2g2267 843 Pfam Receptor serine/threonine kinase 480 514 IPR022126 GO:0004674
Pvu2g2267 843 ProSiteProfiles Bulb-type lectin domain profile. 22 144 IPR001480 -
Pvu2g2267 843 CDD B_lectin 28 150 IPR001480 -
Pvu2g2267 843 PANTHER - 8 842 - -
Pvu2g2267 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Pvu2g2267 843 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2267 Pvu-Chr2 38384920 38392920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2267 512 843 Receptor kinase-like Gene Family AT4G11530 57.567 6.08e-130 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g2267 PK_Tyr_Ser-Thr 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2267 - - gmx:106799702 1463.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2016 6 30130648 30134447 Pvu2g2267 2 38384920 38392920 PCT