Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2265 ATGCACTATGCTAAAAGTCCTTCAAGCTTTCTCATGAGTCAATACAACAAGCATAGCATCTACCTGCTTTGCGCTAAGATTCTACTATTCAGCTTCTCGTATTGCTCTTCTTCTGATACCCTATTTGCTGACAAAGGCATCAGAGATGGAGAGCTTCTTGTTTCAAAAGCCCAGACATTTGCTCTTGGATTCTTCAGTCCAGGCAAGTCCAACTTCCGCTATGTGGGAATATGGTACAACAACGTCCAAGAACAAACTGTTGCTTGGGTGGCAAACAGAAACACTCCCATCAATGACACTTCTGGGTTTCTTTCAATCAACCCAGATGGAAACCTAGTACTCCAACACAAATATAGCACCATTCCCGTTTGGTCTACCAATATTTCAACTTCCCAATCAAACAGCACCAAAGTCATGGCTAAACTCACAGATATAGGTAACCTTGTTCTGATTCTTGAGAACACCGAAGCTTTCATCTGGCAAAGCTTTGACCATCCCACTGATACCTTGCTTCAAGATCTAAAAGTTGGATTTAACAGAAGAACAAACCAGAGTTGGTTCCTCCAATCTTGGAAAACAGATGATGATCCCGGAACAGGTTCTTACACTTTGAAAATAAGCAGCACTGGGAAACCACAGCTGTTCTTTTATCACCTGAACATTCCCTTTTGGCGAGGCGGATCGTGGAACGGTGAATTATTTATGGGTATACCCGACATGAAGAGAGAAATCTTTACTTTTAACGTTTCTTTTATAGAAGATGACAACCAGGTAGTACTCTCATATAACACGGTTGATAAGCCCTTGGTCTCTCGGGTAGTAGTTCAACCGTCAGGTTTCTTTCAAGTATTCACTTGGGATAACCAAAAGAGTCAATGGAATAGGTACTGGTCTGAACCAACAAATCAATGTGATAACTATGGAACCTGTGGATCAAACAGTAACTGTGACCCTTTGAACTTTGAGGAATTTCGGTGTTCTTGTCTACCTGGGTTTGAACCCAAATTCCCACATGATTGGTATGATAACAGAGATGGGTCAGGAGGGTGCGTGAGGAAGCAAGGTGCATCCGTTTGTGGGAATGGAGAAGGGTTTGTGAAACTTGAAGGCTTGAAGCTTCCTGATACCTCCGAGGCAACTGCCAAAGAGGGTTGGAGTTTGGAAAAGTGTGAGGAGGATTGCTTGAGAAACTGCTCTTGCACTGCATATGCAGTTCTTGATGTAAGAAATGGTGGAAGTGGGTGCTTGGCATGGCATGGAAATTTGATAGACATACAAAAACTGAGTGATCAAGGCCAAGATTTATTTGTCCGTGTTGATGCAGTTGAACTAGCAAATTATAACAAAAAAACAAAAGGAGTAAGCGGTAAAAAGAGGATGGTTGCAATTCTGATTGCTTCAGTACTAGCAAGTCTCATTCTTTTCTCCTGTGTATATTACTTGTGGAAGAGAAAAAGCAAA 1461 0.4182 MHYAKSPSSFLMSQYNKHSIYLLCAKILLFSFSYCSSSDTLFADKGIRDGELLVSKAQTFALGFFSPGKSNFRYVGIWYNNVQEQTVAWVANRNTPINDTSGFLSINPDGNLVLQHKYSTIPVWSTNISTSQSNSTKVMAKLTDIGNLVLILENTEAFIWQSFDHPTDTLLQDLKVGFNRRTNQSWFLQSWKTDDDPGTGSYTLKISSTGKPQLFFYHLNIPFWRGGSWNGELFMGIPDMKREIFTFNVSFIEDDNQVVLSYNTVDKPLVSRVVVQPSGFFQVFTWDNQKSQWNRYWSEPTNQCDNYGTCGSNSNCDPLNFEEFRCSCLPGFEPKFPHDWYDNRDGSGGCVRKQGASVCGNGEGFVKLEGLKLPDTSEATAKEGWSLEKCEEDCLRNCSCTAYAVLDVRNGGSGCLAWHGNLIDIQKLSDQGQDLFVRVDAVELANYNKKTKGVSGKKRMVAILIASVLASLILFSCVYYLWKRKSK 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2265 487 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 197 IPR036426 -
Pvu2g2265 487 Pfam S-locus glycoprotein domain 224 336 IPR000858 GO:0048544
Pvu2g2265 487 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
Pvu2g2265 487 PANTHER - 31 452 - -
Pvu2g2265 487 SMART blect_4 44 166 IPR001480 -
Pvu2g2265 487 ProSiteProfiles Bulb-type lectin domain profile. 38 163 IPR001480 -
Pvu2g2265 487 ProSiteProfiles PAN/Apple domain profile. 359 440 IPR003609 -
Pvu2g2265 487 Gene3D - 33 164 IPR036426 -
Pvu2g2265 487 SMART ntp_6 360 439 IPR003609 -
Pvu2g2265 487 Pfam D-mannose binding lectin 86 192 IPR001480 -
Pvu2g2265 487 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 31 452 - -
Pvu2g2265 487 CDD PAN_AP_plant 360 439 - -
Pvu2g2265 487 CDD B_lectin 47 166 IPR001480 -
Pvu2g2265 487 Pfam PAN-like domain 359 425 IPR003609 -
Pvu2g2265 487 Gene3D Hepatocyte Growth Factor 357 437 - -
Pvu2g2265 487 PIRSF SLG 12 454 IPR035446 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2265 Pvu-Chr2 38368702 38370261 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2265 - - pvu:PHAVU_002G2200000 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2265 2 38368702 38370261 Pvu6g2018 6 30144775 30148572 PCT