Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2264 GGCTGCCTAGCCAATGGACAAGAGATAGCAGTGAAAAGATTGTCCGAACATTCAGGTCAAGGAACAGAAGAGTTTAAAACTGAAGTTAGATTATTAGTTAAACTTCAACACAGAAATCTTGTGAGGTTGCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATGTTAGTTTATGAATACCTACCAAATAAAAGCTTGGACTTCTTCATATTCGATGAAAAGCGAAGGTCATCACTGACTTGGGATAAGCGCTTTGAAATCATTTTGGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCATAGAGATCTAAAAGCCAGCAATGTTCTCCTTGATGCTGCAATGAATCCCAAAATCTCAGATTTTGGTATGGCTAGAATATTTGGAGAAGATCAAATCCAAGCAAGGACGAGAAGAGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGGATGGACGCTATTCAACAAAATCTGATGTCTTTAGTTTTGGGGTCTTACTCCTAGAGATTATTGCTGGGAAGAGGAATACAGATTGTGAAAAGGGAAGTCCCTCTCTAAATTTGATTGGACATGTGTGGATAGTTTGGACAGAAGGAAGGGCCTTGGATATAGTTGATTCAACACTGCCTCAGTCTTATTCTCCATCTCTTGTTCTGAGGTGCATTCAAATTGGTCTATTGTGCGTGCAAGAAAATTCAGCAAATAGACCTTCCTTGTCAGAAGTTGTTTTCATGCTAGGCAATGAAACACCTCTATCCCCACCCGAAAAGCCAGCATTTTTATTCAATGGAGACAAAGATTGGCCGGAGCCATCAACATCAGGGGGAGGATCTTCGATATATGAAGTAACAGCCACTACCATCATCGCCCGCTAG 903 0.402 GCLANGQEIAVKRLSEHSGQGTEEFKTEVRLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDEKRRSSLTWDKRFEIILGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDQIQARTRRVVGTYGYMSPEYAMDGRYSTKSDVFSFGVLLLEIIAGKRNTDCEKGSPSLNLIGHVWIVWTEGRALDIVDSTLPQSYSPSLVLRCIQIGLLCVQENSANRPSLSEVVFMLGNETPLSPPEKPAFLFNGDKDWPEPSTSGGGSSIYEVTATTIIAR* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2264 300 SUPERFAMILY Protein kinase-like (PK-like) 4 272 IPR011009 -
Pvu2g2264 300 SMART serkin_6 2 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2264 300 ProSiteProfiles Protein kinase domain profile. 1 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2264 300 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 293 - -
Pvu2g2264 300 Gene3D Transferase(Phosphotransferase) domain 1 60 261 - -
Pvu2g2264 300 Gene3D Phosphorylase Kinase; domain 1 1 59 - -
Pvu2g2264 300 CDD STKc_IRAK 1 255 - -
Pvu2g2264 300 PIRSF ILK 4 258 - -
Pvu2g2264 300 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 1 293 - -
Pvu2g2264 300 Pfam Protein tyrosine and serine/threonine kinase 6 252 IPR001245 GO:0004672|GO:0006468
Pvu2g2264 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2264 Pvu-Chr2 38366362 38367597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2264 1 273 Receptor kinase-like Gene Family AT4G11530 60.432 3.06e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g2264 PK_Tyr_Ser-Thr 6.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2264 - - aprc:113859914 492.656