Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2263 ATGAAGTTGCTTTCAGCTAAGGAGTTTCTCAGTGTGTTTCTTCTGCTCATGCTTCTTTACCCTTGTTGCCATTCACTCTACAACACCATAACCATAAGCCATCCCATGAAAGACGGCGACGTTTTGGTCTCCGACGGGTTAGGAAACTTTGCACTCGGTTTCTTCAGCCCACGAAACTCCACAAGCCGATACGTTGGGATATGGTACAACAAAATTTCGGAACAATCGGTAGTGTGGGTTGCCAACAGGGACACTCCGCTTAGCGACACTTCCGGTGTTCTATCTATTAACAACCACGGAAACCTCGTACTCCACGATAATAACACCCGAAACCTCGACCCCGTTTGGTCTTCAAAGGCTTCCATGACATCAACGAACGTTTCGGCCAAGCTTTTGGACACGGGAAACCTAGTTTTGATCCAAACAGACAAAAATGTTGTTCGTTGGCAGAGTTTTGATTATCCTAGTAATACCATGCTTTCATTCATGAAACTCGGGTTGGACCGAAAAAGCGGTCTGAACCGGTTTTTAACATCTTGGAAATCAGAAACAGACCCTGGAACCGGGAACTTGACGTATAAAATCGACCCAACCGGGTTTCCGCAACTGTTTCTTTACAAAGGCGACGCCCCGTTGTGGAGGGTCGGGTCATGGACGGGTCAGAGATGGAGCGGTGTGCCCGAGATGACTCCGAATTTTATTTTCAACGTTAGCTACGTGAACGACGAGAATGAGGTTTCGATAATGTACGGAGTGAAGGACCCGACGGTGTTCTCGAGAATGGTGCTGGAGGAGAGTGGGCACATGACGAGGTCCACGTGGCAGGATCACGAGCGCAGGTGGTTTCAGATATGGGACGCGCCAAAGGAGGAGTGCGACAACTTCAGGCGGTGCGGGTCGAACACGAACTGCGACCCTTATCAGGCGGATAAGTTCGAGTGCGAGTGTTTGCCGGGGTTCGAACCGAGGTCTGAGAGGGAGTGGTTTCTTCGGGACGGTTCGGGTGGGTGCACGCGGAAGAAAAATGTGTCCACGTGTGGAAGTGGAGAGGGGTTCGTGGAGGTGGCACGTGTGAAGGTTCCGGACACGTCGAAGGCGCGTGTGGTAGCCATGATTGGAATGAGAGAGTGCAGAGATAGATGCTTGAAGGATTGCACGTGTGCGGCGTACACGAGTGCGAACGTGAGCTTGGAGAGTGGGTGTGTTACTTGGCACGGTGACATGGAGGACACGAGGACGTACACGCAAGCAGGACAGAGCTTGTTCGTGAGAGTAGATGCCCTTGAATTAGCTAAATATGCAAAACATCCGTATGGTTCTCTTGGAAAGAAGGGGATGGTGGCAATTTTAACCGTTGCTATTTTTATATTATTGTTTTTGGCAGTCACTTTCGTGTATTGGTTTGTTAAAGCCAGGAAACAAGGGATAAGAAGGGATCGCAAGCATTCCTTTCGTCTTAAATTGGAGGACTCTACCCATCTACAAGAATTTGACACTACAAAAAATTCAGATTTACCATTCTTTGATCTTAGCTCCATAGCTGCTGCCACAGACAATTTCTCTGATTCTAACAAGCTTGGCCAAGGGGGTTTTGGTTCTGTTTATAAGGGTTTACTGAGTAATGGAATGGAAATAGCAGTGAAGAGGCTGTCAAAGTACTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGGTAGTTTTGATCTCAAAGCTCCAACACAGAAATCTGGTGAGGATTTTAGGTTGCTGCGTTCAAGGAGACGAGAAGATGTTAATCTATGAGTATTTGCCTAACAAGAGTTTGGACTCTTTAATTTTTGATGAATCTAAAAGGTCACAACTAGACTGGAAAAAGCGATTTGATATCGTATGTGGGATTGCTAGAGGAGTCTTATACCTTCACCAAGATTCACGATTGAGAATCATTCATAGAGACCTAAAAGCCAGCAATGTCTTGCTGGACTCTGCATTGAACCCCAAAATTGCAGATTTTGGTATGGCTAGAATATTTGGTGGAGACCAAATTGAAGCAAACACAAATCGTGTTGTTGGAACCTATGGCTATATGTCACCAGAATATGCCATGGAAGGACAATTTTCTATAAAGTCTGATGTATACAGCTTCGGAGTTTTACTTCTAGAGATTATTACAGGCAGAAAGAATAGTGGTCAACACGAAGACATTACAGCCACAAATTTAGTTGGACATATATGGGATCTGTGGAGAGAAGGGAAAACCATGGAGATTGTTGACCAATCACTAGGAGAGTCGCGCTGTGACCTTGAAGTCCAAAGATGCATACAAATTGGTCTTTTATGCGTGCAAGATTATGCCGCTGACAGACCATCTATGTCAGCAGTTGTTTTCATGCTGGGTAATGACTCAACTCTTCCTGCTCCAAAACAACCAGCGTTTATTTTCAAGAAAACTAATTATGAGAGTTCAAATCCATCAACCAGTGAAGGAATTTATTCAGTAAATGATGCAAGTATAACTATGATTGAAGCTCGCTGA 2514 0.4531 MKLLSAKEFLSVFLLLMLLYPCCHSLYNTITISHPMKDGDVLVSDGLGNFALGFFSPRNSTSRYVGIWYNKISEQSVVWVANRDTPLSDTSGVLSINNHGNLVLHDNNTRNLDPVWSSKASMTSTNVSAKLLDTGNLVLIQTDKNVVRWQSFDYPSNTMLSFMKLGLDRKSGLNRFLTSWKSETDPGTGNLTYKIDPTGFPQLFLYKGDAPLWRVGSWTGQRWSGVPEMTPNFIFNVSYVNDENEVSIMYGVKDPTVFSRMVLEESGHMTRSTWQDHERRWFQIWDAPKEECDNFRRCGSNTNCDPYQADKFECECLPGFEPRSEREWFLRDGSGGCTRKKNVSTCGSGEGFVEVARVKVPDTSKARVVAMIGMRECRDRCLKDCTCAAYTSANVSLESGCVTWHGDMEDTRTYTQAGQSLFVRVDALELAKYAKHPYGSLGKKGMVAILTVAIFILLFLAVTFVYWFVKARKQGIRRDRKHSFRLKLEDSTHLQEFDTTKNSDLPFFDLSSIAAATDNFSDSNKLGQGGFGSVYKGLLSNGMEIAVKRLSKYSGQGIEEFKNEVVLISKLQHRNLVRILGCCVQGDEKMLIYEYLPNKSLDSLIFDESKRSQLDWKKRFDIVCGIARGVLYLHQDSRLRIIHRDLKASNVLLDSALNPKIADFGMARIFGGDQIEANTNRVVGTYGYMSPEYAMEGQFSIKSDVYSFGVLLLEIITGRKNSGQHEDITATNLVGHIWDLWREGKTMEIVDQSLGESRCDLEVQRCIQIGLLCVQDYAADRPSMSAVVFMLGNDSTLPAPKQPAFIFKKTNYESSNPSTSEGIYSVNDASITMIEAR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2263 837 Pfam Protein tyrosine and serine/threonine kinase 523 788 IPR001245 GO:0004672|GO:0006468
Pvu2g2263 837 Pfam PAN-like domain 346 410 IPR003609 -
Pvu2g2263 837 SMART blect_4 33 155 IPR001480 -
Pvu2g2263 837 CDD STKc_IRAK 526 791 - -
Pvu2g2263 837 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Pvu2g2263 837 SMART ntp_6 347 425 IPR003609 -
Pvu2g2263 837 Pfam Domain of unknown function (DUF3403) 793 837 IPR021820 GO:0004674
Pvu2g2263 837 CDD PAN_AP_plant 344 425 - -
Pvu2g2263 837 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 54 832 - -
Pvu2g2263 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Pvu2g2263 837 CDD B_lectin 33 155 IPR001480 -
Pvu2g2263 837 Gene3D Transferase(Phosphotransferase) domain 1 596 799 - -
Pvu2g2263 837 PIRSF SRK 1 837 IPR024171 GO:0004674
Pvu2g2263 837 SUPERFAMILY Protein kinase-like (PK-like) 503 791 IPR011009 -
Pvu2g2263 837 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 54 832 - -
Pvu2g2263 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 186 IPR036426 -
Pvu2g2263 837 ProSiteProfiles Protein kinase domain profile. 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2263 837 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Pvu2g2263 837 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Pvu2g2263 837 Gene3D - 22 152 IPR036426 -
Pvu2g2263 837 SMART serkin_6 520 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2263 837 Gene3D Phosphorylase Kinase; domain 1 480 595 - -
Pvu2g2263 837 Pfam D-mannose binding lectin 77 181 IPR001480 -
Pvu2g2263 837 ProSiteProfiles Bulb-type lectin domain profile. 27 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2263 Pvu-Chr2 38359718 38365891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2263 480 837 Receptor kinase-like Gene Family AT4G11530 57.534 1.59e-136 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu2g2263 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2263 - - gmx:100812814 1503.03