Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2250 ATGAACAGACCTACCTTGATTTTCATAATAGGAATTTGTATAGGCTTTGTGGTTGGGATGAGTTTGACATTATCCATAGTATTCTGGCGCATGAGGGGAAGGAAGCACACAAAGGTTGATAAGAGCATTTCTCACAGAGCAGTGACCATTCCTGTTAAAGAGAAAGGGTCTGGTTCTAACTCCACATTATCAGAGGGTGAGGAGTCACCCAGGACATCTGAGTGGAGTAACACGCCTTTATGGTTGGAAAATCTTAGGAGAAGCAGTGCGATATCAGCATGCGGAATTCCCAAGTATTCTTACAAAGATATACAAAAGGCTACTTCTAATTTCACCACCACCATTGGCAACGGAGCCTTTGGTCCTGTTTATAAAGCGCACATGGCTACAGGTGAGACAGTTGCAGTTAAAGTCTTAGGTACTAATTCAAAACAAGGAGAGCAGGAATTTTTAACTGAGGTTTTATTACTTGGAAGATTACATCACAGAAACCTTGTGGATTTGGTGGGATATGTGGCAGAAAGAGGAAAACATATGCTTCTCTACACTTACATGAGCAATGGCAGTGTTGCTTCCCATTTGTATGATTTTGGAAAAAATCACGAGCCACTTAATTGGAATTTGAGGCTTGGCATAGCACTAGATGTTGCTAGGGGACTGGAATATCTACATTGTGGGGCTTCTCCACCTGTTGTGCACCGTGACATCAAATCTTGCAACATACTGTTGGATCAGTCTATGAAGGCCAAGGTCACTGACTTTGGGCTTTCCAGACCAGAGATGATCAAACCTCGCACATCAAATGTCCGTGGAACTTTTGGATATCTTGATCCTGAGTATTTGTCTACAAGAACCTTCACTAAGAAAAGTGATGTTTATAGCTTTGGTGTGCTACTGTTTGAGCTCATCACTGGCAGGAATCCGCAGCTTGGGCTCATGGAATATGTAAAACTAGCAGCCATGGAAGGTGAGGGTAAGGTTGGATGGGAAGAAATTGTGGATGGGCAATTAAATGGAAAATATGATGTGCATAATCTTAATGACATGGCTTCACTTGCATTCATGTGTGTTAATGAAGTCTCCAAAAGCCGACCACCGATGTGCGACATTGTTCAAGCATTATCTCAGCTTTGTAAGAGGCAAAGTAAAAATCTTGGTCGAATATCATCTGCTGCTGCATTAAAGGATGTGTGTATTGAAGTGGACCATATTGAAACTAAGGACTTTACATCAACTGCCAGTACAAATATATTGGCCAGAATGCATAGTCGATGA 1275 0.4173 MNRPTLIFIIGICIGFVVGMSLTLSIVFWRMRGRKHTKVDKSISHRAVTIPVKEKGSGSNSTLSEGEESPRTSEWSNTPLWLENLRRSSAISACGIPKYSYKDIQKATSNFTTTIGNGAFGPVYKAHMATGETVAVKVLGTNSKQGEQEFLTEVLLLGRLHHRNLVDLVGYVAERGKHMLLYTYMSNGSVASHLYDFGKNHEPLNWNLRLGIALDVARGLEYLHCGASPPVVHRDIKSCNILLDQSMKAKVTDFGLSRPEMIKPRTSNVRGTFGYLDPEYLSTRTFTKKSDVYSFGVLLFELITGRNPQLGLMEYVKLAAMEGEGKVGWEEIVDGQLNGKYDVHNLNDMASLAFMCVNEVSKSRPPMCDIVQALSQLCKRQSKNLGRISSAAALKDVCIEVDHIETKDFTSTASTNILARMHSR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2250 424 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 7 409 - -
Pvu2g2250 424 MobiDBLite consensus disorder prediction 50 75 - -
Pvu2g2250 424 SMART serkin_6 109 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2250 424 Gene3D Phosphorylase Kinase; domain 1 80 184 - -
Pvu2g2250 424 CDD STKc_IRAK 115 377 - -
Pvu2g2250 424 Pfam Protein tyrosine and serine/threonine kinase 111 374 IPR001245 GO:0004672|GO:0006468
Pvu2g2250 424 MobiDBLite consensus disorder prediction 54 75 - -
Pvu2g2250 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Pvu2g2250 424 ProSiteProfiles Protein kinase domain profile. 109 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2250 424 SUPERFAMILY Protein kinase-like (PK-like) 87 374 IPR011009 -
Pvu2g2250 424 Gene3D Transferase(Phosphotransferase) domain 1 185 397 - -
Pvu2g2250 424 PANTHER OS01G0253100 PROTEIN 7 409 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2250 Pvu-Chr2 38135357 38140364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2250 99 377 Glycoside Hydrolase AT3G07070 43.345 1.43e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pvu2g2250 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2250 - - gmx:100816549 677.937