LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g2243	ATGGCTTCCCGCAATCAGAGTAATAAAAAGTTAGGCCCCGACGAAGCTACTCCGAACATGCGTCGCAGGGGCATCGGAGCTGAGAAGATGGAGCCACAGGGCGGTGCCGCTTCTGCTGGGAGGGCTAGAACACCGTTTTCCGTTGTCACCAATCGCTCCGATCTTAACACGACGAGTGATGTCACCGAGGCGGTTGATTTCACGAAGGAGGAGGTGGAGACTTTGCTGAATGAAAAGAAGGAAAAGAAGAAGGGGAATACCTATGATAATAATAAGAAAAATATGGACCAGATGACGGTTCTTATTAAGCGCCTTAAGGCCTGCGTTCGCTGGTATAAAAGGATAGAAGAAGGGCATGTTCAAGAAAAGGAAAAGCTTCAGTCTGAGCTAGAGGCTTCTGAGAAGAAGTGCAATGATACTGAAACTGAGATGAAGAATAAGATTGATGAGTTGAAGGAGACTCTATCTGATTTGAGGATGAAAAATTCTTCTCTGGAAGAGAGAATTGTGAAGGAAGAATCAGATAAATTGGAAGCGATTAATTGTTATGGTAAAGAAAAGGAAGTCAGAACTGAAGCTGAGAAAGTTCGGGATGAGAAATCAGCTGAGCTTGAGAAAGTTCGGGATGAGAAATCAGTTGCTGAGAAGCAGGCCACTTTCTCACAGGAGTATAATATGAACTTACTGCAGTACAATAGTAGACTTCAATCTCAACTTGAAACATGTAACGAGGCCCTTAAACGAGTTGAAACAGAGAAAACAACCATTGTTGAGAGCCTTAGCAATGTAAGATGCCACTATAAGGCAGTGCAGGATCAGTTGTCATCTCTTAAAGTTTCACATAACGAGCTTATAAAGCAGAACGAAGACTTAAAGAAAATTAAAGATCATCGTGACCATTTATTGGGACAAGTACATGAATTAACCGAAAAAGTAGTATGTCACGAAGAATATACTGGGAAAATATGTACACACTTAGATAAGTTGACGATTAAAACAAATGCTATTGAGGAGACTTGTTCATCTCAAAAAGATCAAATACATATACTGCAGAAGCAGTTGTTTGCGGAAAAAGAAAAGTTAAAGAATGCTGATCTATCAGCTTCAGAAACAAGAATAGTGTTTGAAGAGCAGAATAAAATTATACAGAAACTACAGGATCGTTTGGCAGATAAAGAATTTCAAGTAGTTGAAGGAGAGAAGCTAAGGAAAAAACTGCATAACACTATTCTGGAACTAAAAGGAAATATTCGTGTTTTCTGCCGTGTACGGCCGCTCCTACCAGATGAGAATACGGGAACAGACACGGTTGTTTCTTTCCCTACGTCAACAGAAGCGCTTGGTCGGGACATTGAATTGTCACAAAGCGGGCAGAAGTACAATTTCACATTTGATAAGGTATTCGATCAGGAAGCTTCTCAGCGTGACGTTTTTGTAGAGATTTCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTGTGCATCTTTGCATATGGACAGACGGGTTCAGGTAAAACCTATACTATGATGGGTAGGCCTGATGCGCCAGATCTGAAAGGATTGATACCACGTTCTTTAGAACAGATATTCCAGACTAGCCAGTCTCTAAAAGACCAGGGATGGAAGTACACAATGCAGGCATCAATACTCGAAATATATAATGAGACCATCAGAGATTTGTTATCATATGCACGAAAGGAAAATGGTGCTTCCAGCAGCAAGCAGTACACTATCAAACATGATGCAAATGGAAACACACATGTTTCGGACCTTACCATAAAGGATGTTTGTAGCGCAGATGAGATTTCCTCCCTCTTACAGCAGGCTGCACAAAGCAGGTCAGTGGGAAGAACACAAATGAATGAACAGTCATCGAGAAGCCACTTTGTCTTTACCTTGCGTATAAGTGGGAAAAATGAGAACACTGAACAACAAGTCCAAGGTGTCTTGAACCTGATTGATCTTGCGGGGAGTGAAAGACTCTCAAGGAGTGGGGCAATGGGAGATCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTATCGTCTTTAAGCGATGTCATATTTGCTTTGGGAGGAAAGAAAGAAGAGCATATTCCTTTTAGGAATTCCAAGTTGACGTACCTTCTTCAGCCATGTCTAGGTGGCGACTCCAAAACGTTGATGTTTGTCAACATCTCACCTGATCAATCTTCCACTAGTGAGTCACTATGCTCTCTTCGCTTTGCAGCCAGAGTCAATGCATGTGAAATTGGGATTCCACGGCGTCAAACTCATACTTCATCAACACGCTCCTCAGAATCCCGTTTGAGCTATGGTTAA	2325	0.4189	MASRNQSNKKLGPDEATPNMRRRGIGAEKMEPQGGAASAGRARTPFSVVTNRSDLNTTSDVTEAVDFTKEEVETLLNEKKEKKKGNTYDNNKKNMDQMTVLIKRLKACVRWYKRIEEGHVQEKEKLQSELEASEKKCNDTETEMKNKIDELKETLSDLRMKNSSLEERIVKEESDKLEAINCYGKEKEVRTEAEKVRDEKSAELEKVRDEKSVAEKQATFSQEYNMNLLQYNSRLQSQLETCNEALKRVETEKTTIVESLSNVRCHYKAVQDQLSSLKVSHNELIKQNEDLKKIKDHRDHLLGQVHELTEKVVCHEEYTGKICTHLDKLTIKTNAIEETCSSQKDQIHILQKQLFAEKEKLKNADLSASETRIVFEEQNKIIQKLQDRLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDENTGTDTVVSFPTSTEALGRDIELSQSGQKYNFTFDKVFDQEASQRDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDQGWKYTMQASILEIYNETIRDLLSYARKENGASSSKQYTIKHDANGNTHVSDLTIKDVCSADEISSLLQQAAQSRSVGRTQMNEQSSRSHFVFTLRISGKNENTEQQVQGVLNLIDLAGSERLSRSGAMGDRLKETQAINKSLSSLSDVIFALGGKKEEHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSTSESLCSLRFAARVNACEIGIPRRQTHTSSTRSSESRLSYG*	775

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g2243	774	Coils	Coil	375	395	-	-
	Pvu2g2243	774	PANTHER	KINESIN-LIKE PROTEIN KLP-3	22	774	-	-
	Pvu2g2243	774	Gene3D	Kinesin motor domain	357	752	IPR036961	-
	Pvu2g2243	774	PRINTS	Kinesin heavy chain signature	491	512	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Pvu2g2243	774	PRINTS	Kinesin heavy chain signature	619	636	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Pvu2g2243	774	PRINTS	Kinesin heavy chain signature	650	668	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Pvu2g2243	774	PRINTS	Kinesin heavy chain signature	700	721	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Pvu2g2243	774	CDD	KISc_C_terminal	414	752	-	-
	Pvu2g2243	774	Coils	Coil	190	217	-	-
	Pvu2g2243	774	ProSiteProfiles	Kinesin motor domain profile.	416	750	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Pvu2g2243	774	MobiDBLite	consensus disorder prediction	1	51	-	-
	Pvu2g2243	774	ProSitePatterns	Kinesin motor domain signature.	649	660	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Pvu2g2243	774	Coils	Coil	232	252	-	-
	Pvu2g2243	774	SMART	kinesin_4	414	758	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Pvu2g2243	774	PANTHER	KINESIN-LIKE PROTEIN	22	774	-	-
	Pvu2g2243	774	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	376	748	IPR027417	-
	Pvu2g2243	774	Coils	Coil	116	175	-	-
	Pvu2g2243	774	Pfam	Kinesin motor domain	422	748	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g2243	Pvu-Chr2	38080033	38085890	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g2243	377	747	Calmodulin-binding Proteins	AT5G65930	40.591	2.80e-77	270

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g2243	K10405		-	gmx:100780319	1067.37

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g2243	2	38080033	38085890	Pvu2g2243	2	38080033	38085890	ECH
	Pvu2g2243	2	38080033	38085890	Pvu6g2036	6	30232130	30237464	PCT