Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2224 ATGCTGGACTCTTTAGCTTGGTGCCAAAGCTTTAAGGGATATGACCTTACCAAACAAAAGAGTCCGGGTTACTCTCATGCTATTTCACGAGTTTATAGAAATTCTATTTTTATGCTTTATTCAGTCAACAAGAAAGTGACACTACTGCCACATGGTGCTAGTCATGGGATATTTCATGGGAAATCTGTGTCAGAAAATTTCATTAAAAGGCCTACTCCTCTCTATGTTCCATTAAGTTCTGGTTGGAAAGGTTTGTATAGGCCTCGTTGGGAACGGCTGCAAACAAATGTAGCATATGATGTTGCTGAAGGTGTTGATGTAATCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACCGTCATAATTGTGCCAACGTTCAAGTCACTTAAAGCCAGTCCTATACTTGGTTTCTTCTGTGCTGGTGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAGTTTTATCCGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTAAAAGCTCTCGCAAAATATGCTTTTGGAATGGGATTTGCTCAGGTTTTACTGTCTACTTTAGCATTTACTGCTTTTGAGCTTCCTCCAAATGGAGCTGTTGGAACAAAAGTTTTGGAATTCCTTTTCCACTCTAGGCCTGACCTGGTGAACATAAGAAGTGTCGATGAAGCTGTAGTGATTGGTGCTGCTCTCTCTCTATCATCTTCTGCATTTGTTTTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCTACAAGATTTGGTTCAGCAACTCTTGGAATACTTCTTTTACAGGACTTAGCCGTTGTTCCTCTTTTAGTCATACTTCCAATACTAGAGAGCCAGAATATAACTGAGGGGAGTATTTGGCCCACGCTTGCTCAAGAAAGTTTAAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTCGGGGCAAAGTACATTCTCAGTAGAGTTTTTGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTCTGCTTGCTGACAATTGCTGGGACTTCACTAGGCACACAGAATTTGGGCTTTAGTGACACGCTCGGGGCTTTTTTAGCTGGGGCGATTTTAGCAGAGACAAACTTCAGGACCCAGATTGAAGCTGACATAAGACCATTTAGAGGCTTGCTGCTTGGATTGTTTTTTCTAACTACAGGAACTTCAATTGACATGCAGCTCCTTTTACGAGAATGGCCAAATGTACTTTCACTCTTGGGAGGTTTAATTGTTATAAAGACATTGATCATAACTGCAATTGGTCCTCGTGTTGGGCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAATTTGGATTTGTTGTTTTCTCTTTAGCAAATAGGCTTGGGGTGCTTCCTCTTGAGCTCAACAAGCTGCTTATAATTGTTGTGGTATTGTCGATGGCATTAACCCCATTTCTGAACGAAGCTGGAAGAAGGGCTGCTAGTTTTATTGAAGAAAAATCTGATCCTGAGAATAATCAGAAAGCTTCGGAGACTATTAACTTCAACGCTAGGGAACCTATTGTTATCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCCAATTTCCTGTCCAATCCATTAGCTTCAGGAGGAGAGAGTGATGAAGTAGGATGGCCTTATGTGGCATTTGATCTGGACCCCAATGTTGTAAAGGCAGCTAGAAAAATTGGCTTTCCTATAGTCTATGGGGATGGATCACGTCCCGATGTTCTTCAATCTGCTGGTGTCTCTTCTCCAAAGGCTTTTATGATTATGTACACTGGAAAGAAGAAGACAATTGATGCTGTTCAGAGGCTAAGATTGACATTTCCCACGATCCCAATCTATGCCAGAGCTCGTGATCTAAAGCATCTATTAGATCTGAAAAAGTCAGGTGCAACAGATGCCATTTTGGAAAATGCAGAGACTAGCTTGCACCTGGGTTCTAAGCTGCTGAAAGGCCTTGGTGTGATGTCTGATGATGTAGCATTTTTGAGTCAGCTTATTAGAGATTCTATGGAGCTCCAAGCTGAAGAAGCAAGCAGCCAACCTGAAAATCGTGGATTAGATATTATGAAACCGCTGCAGGTGAAAGCTTCTGACACGAGGGAAGCACGTGTTCCGGTGGCAACAACTTCACCAGAATCTGAATTATCAGAAATGAATCAGAAAGACCAAGAACATGAACTTAATGAAGCTGTGAAATTAGAAGGAAATGGTGTTTTACTTGGCAAACAAAGTAGTGAAGAAAGCGCAATGGTTGTAGATTCATCAATTTCTTCTTCCCATACTGCTGTCACTGAGGAACCCTGA 2379 0.417 MLDSLAWCQSFKGYDLTKQKSPGYSHAISRVYRNSIFMLYSVNKKVTLLPHGASHGIFHGKSVSENFIKRPTPLYVPLSSGWKGLYRPRWERLQTNVAYDVAEGVDVINDLGLDTLTFLAVTVIIVPTFKSLKASPILGFFCAGVVLNQFGLIRNLTDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGFAQVLLSTLAFTAFELPPNGAVGTKVLEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILESQNITEGSIWPTLAQESLKALGGLGLLSLGAKYILSRVFEVVADTRSSEAFVALCLLTIAGTSLGTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQLLLREWPNVLSLLGGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEEKSDPENNQKASETINFNAREPIVILGFGQMGQVLANFLSNPLASGGESDEVGWPYVAFDLDPNVVKAARKIGFPIVYGDGSRPDVLQSAGVSSPKAFMIMYTGKKKTIDAVQRLRLTFPTIPIYARARDLKHLLDLKKSGATDAILENAETSLHLGSKLLKGLGVMSDDVAFLSQLIRDSMELQAEEASSQPENRGLDIMKPLQVKASDTREARVPVATTSPESELSEMNQKDQEHELNEAVKLEGNGVLLGKQSSEESAMVVDSSISSSHTAVTEEP* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2224 792 ProSiteProfiles RCK N-terminal domain profile. 535 667 IPR003148 GO:0006813
Pvu2g2224 792 MobiDBLite consensus disorder prediction 769 792 - -
Pvu2g2224 792 Pfam TrkA-N domain 536 659 IPR003148 GO:0006813
Pvu2g2224 792 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 88 746 - -
Pvu2g2224 792 Pfam Sodium/hydrogen exchanger family 117 502 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu2g2224 792 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 88 746 - -
Pvu2g2224 792 MobiDBLite consensus disorder prediction 722 750 - -
Pvu2g2224 792 Gene3D - 110 509 IPR038770 -
Pvu2g2224 792 Gene3D - 535 705 - -
Pvu2g2224 792 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 534 678 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2224 Pvu-Chr2 37865830 37879161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2224 1 758 Inorganic Solute Cotransporters AT4G04850 70.850 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2224 - - gmx:100798214 1323.15