Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2221 ATGGAGAACTACCAGTATCCGTCCTACCCTGACTCCGGCGACTCCTCGCCGCGCTCCAGGGAGATCGACTTCGAGAACCCGCCGCCGTGGGACGACCAGCAGACTCAGAACTACAAGGCCAAGTTCATGTGCAGTTACGGCGGCAAGATCCAGCCCCGAACCCACGACAATCAGCTCTCCTACGTCGGCGGCGACACCAAGATCCTCGCCGTCGACCGCGCCATCAAGTTCCCCGCCTTCCTTTCCAAGCTTTCCTCGCTCTGCGGCGCCACGCCGCAAGACCTCACCTTCAAGTATCAACTCCCCGGCGAGGATCTCGACGCCCTAATCTCCGTCACCAACGACGACGACCTGGAACACATGATGCACGAGTACGACCGTCTATATCGCCCTAACGCTAAACCCGTCAGGATGAGACTCTTCCTCTTCACGCTTTCCTCAAACCCTAATTCCTCTTTCTCCTCGGATCGCGATCGCTTCGTAGATGCTCTTAACTCTGCTCCAATTCCTCCGCAACCCGACCCCATCAAAACCCCACCCGTTACTCCTTCTAATGTCGATTACCTCTTTGGTCTTGACAAGGCCGTTGTTCCTCCCACTCTCCCTCCTTCCTTCGCCGCCGTTAAGTTTCACGATCCCGCACCGGAGCCTGTTGCGCCGCAGCCGGAGTATCAGGTCCGCGGTGGAATCTCCGTTTCTGATCGCGTCGTCGGATCGGATCAGAGTGCGAACTCGATCGAGATTCAGAGGCAGTTGCAGCAGGAGATGCAGCGTTTGCAGGTAGCGGAGAATGAATATCGAAGGAGGAGTGAGGATGGTTTCGCCGGTGGCTATGCCGCTGCGGGAGGGGATTATTACATGCAGAAGATGCCGGAGAAGGCTCCGCCGGTTAATGCGCCCCATCCCGCCGGGTACTGGCCGGAGAAACAGTTTTCTGGCGAGGGCTTTCAGACGACGGTCACGACGGCTCCCGGAGGTGCTGATCAGCAGGTTTATGTTATCCCAGCGCCGGGAACGTTCTATCACGCGCCGGTGGTGAGGCCTCCGGCGGCGCAGGGCTACTACGCGGTGCAGAGAATGGGGTCTGACGGTTTCCGTGAGCAGGCGGTCTACGGCGGCGTGTCTCAGCAGAAGACTGCGTTTTCGTCGGCGGGGCCGGCGCAGCCGGTTAAGCCTTCGGGGTATGCTGAGGGATACGGCGTTGTGAGGCCTGGTGGGGTGCCGGATAATGCGGCGTACACGCAATTGGCGTATGATAGTGCGAGTGGGAGGCAGGTTTACTATACTGCGCAGGGAGGGGTGGTGGGTGTTCCGCCGCAGTACCAAGGGGTTCAGCCGGTGGTGGGATCGGATGTTAGGCCCGTTGGGGTTTCGGTGGGCCAGGATGTTAAGGTGGTTAACAAGGTTAACCAAGGTTCTGTGTGA 1425 0.5916 MENYQYPSYPDSGDSSPRSREIDFENPPPWDDQQTQNYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRAIKFPAFLSKLSSLCGATPQDLTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRPNAKPVRMRLFLFTLSSNPNSSFSSDRDRFVDALNSAPIPPQPDPIKTPPVTPSNVDYLFGLDKAVVPPTLPPSFAAVKFHDPAPEPVAPQPEYQVRGGISVSDRVVGSDQSANSIEIQRQLQQEMQRLQVAENEYRRRSEDGFAGGYAAAGGDYYMQKMPEKAPPVNAPHPAGYWPEKQFSGEGFQTTVTTAPGGADQQVYVIPAPGTFYHAPVVRPPAAQGYYAVQRMGSDGFREQAVYGGVSQQKTAFSSAGPAQPVKPSGYAEGYGVVRPGGVPDNAAYTQLAYDSASGRQVYYTAQGGVVGVPPQYQGVQPVVGSDVRPVGVSVGQDVKVVNKVNQGSV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2221 474 CDD PB1_UP2 43 143 - -
Pvu2g2221 474 Coils Coil 245 272 - -
Pvu2g2221 474 MobiDBLite consensus disorder prediction 1 15 - -
Pvu2g2221 474 Gene3D - 60 144 - -
Pvu2g2221 474 SUPERFAMILY CAD & PB1 domains 55 153 - -
Pvu2g2221 474 Pfam PB1 domain 55 143 IPR000270 GO:0005515
Pvu2g2221 474 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 470 - -
Pvu2g2221 474 PANTHER OS05G0427100 PROTEIN-RELATED 1 470 - -
Pvu2g2221 474 MobiDBLite consensus disorder prediction 1 33 - -
Pvu2g2221 474 SMART PB1_new 54 145 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2221 Pvu-Chr2 37828191 37830150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2221 38 166 MAP Kinase Kinase Kinase AT5G57610 42.647 2.35e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2221 - - gmx:100810467 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2221 2 37828191 37830150 Pvu6g2064 6 30414649 30417455 PCT