Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2217 GGAGAAGTAGCAAGTTTAAGGCAACAAGTGCAGTACATGCAAAAATGTAACAGGCAAATGATGGGCGAAGAACTTTCTGGTTTGGGTATTAAGGAGTTGGGGAATCTGGAAAATCGACTGGAAAAGAGTTTGAAGGGTGTTCGCGTGAAAAAGGATCAAATCCTGATTGATGAGGTCAAAGAACTACACCAAAAGGGAACCCTAGCCTATCAAGAAAATGTAGAACTTCATAGAAAGATAAATCTCATACGCGAGGACAATGAAAAACTACAAAAGATGATTGAAGCAAAAGGTAGAAAGGAAGGTGCTGCAACCTCCAATCCTCTTTCCACTATCACTTATGGTTATGACATATTTTCTCCTATAAGTCTCAAGCTAAGCCAGCCATAG 390 0.4 GEVASLRQQVQYMQKCNRQMMGEELSGLGIKELGNLENRLEKSLKGVRVKKDQILIDEVKELHQKGTLAYQENVELHRKINLIREDNEKLQKMIEAKGRKEGAATSNPLSTITYGYDIFSPISLKLSQP* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2217 129 Coils Coil 73 93 - -
Pvu2g2217 129 Pfam K-box region 2 80 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu2g2217 129 PANTHER MADS-BOX TRANSCRIPTION FACTOR 2 129 - -
Pvu2g2217 129 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 129 - -
Pvu2g2217 129 ProSiteProfiles K-box domain profile. 1 86 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2217 Pvu-Chr2 37763736 37772359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2217 2 129 MADS-box Gene Family AT3G57230 46.212 2.18e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2217 K09264 - gmx:100779647 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2217 2 37763736 37772359 Pvu6g2075 6 30493452 30503172 PCT