Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2215 ATGGCTTGGTGGCATAATATTGTTCATAATCCAATTCTTTTCTGTCATGCAATGATAACAATTTTTATCCTCCAAATAATCCCTCTTGCAAACTCACTATCATTTTATTACCCCAACTTTAAGAATGGTGATGTAAAATGGGAAGGGGATGCTTCTATTCTAAAGGGAGCTATCCAAGTCACGTCCAACACCATAGACCAAAACAACAATTACAGTGTTGGGAGAGTCACAAGTTATGAACAGATGCTCCTCTGGGATATGAAGTCTGGAAAGCTTGCTGATTTCACTACCAAATTTTCCTTTGTTATTTTTTCAGAAAAGAGTTACTATGGAGATGGAATGTCATTCTTCCTGGCTGATCCTAATCTCCCACTTCTAAAGGATATTAAAGAAGGAGGTGGTCTTGGACTTGTGGATGGCGAACAAGTATTGAATTCAACTCAACACCCGTTTGTAGCAGTGGAGTTTGACACCTTCCACAACAAACTATGGGACCCTCCAGGTGGCACTCATGTAGGTTTGAATTTCAACTCTATGAAGTCCAACATAACTAAGTCATGGTTGACAGATGTTCAAATTTGGAATGTTTATAATTGCAGCATTAAGTACAATTCAAGTACTCTAAATTTGAGCGTTTCATTCACAATGTACAATGATAGTAAACCACTTGAAGAATACGTTTCATACAAGGTTGATTTGAGAGATCACTTACCAGGGAGGGTTATTCTTGGTTTTTCTGCTGCAACAGGGAAATTGTATGAGGTGCATACATTGAGATCATGGTCATTTAGTTCAAATCTACAAAGTGATGAGAACACAAATGAGATAAAACCAGAAGCAGTCCCACCAGATTCCTATCTTATGCCTGAAAAAGGAAAGAAAATAGAATTGAGGGTAGGGCTTGGAATTGGTCTAGGCCTGGTTTTGAGTTTGTCAGGGCTGATTTTTACTTTATTGTGGAAGAGGAGTAGAGGTAGAAAAAAAGAGTTAGTTTTTAATCTCAATATGGGTGATGTATTCCCAAAGGGCACTGGACCTAAGAGCTTTTCCTATAATGAGCTAGCAAGTGCTACAAACAAATTTTCCGAGTCTGAGAAGCTGGGGCAAGGTGGCTTTGGTGGTGTGTATAAAGGTTATTTGAAAGACATAAAGTCCTATGTTGCTATCAAAAGAATATCAAGAGAGTCTAGACAGGGAATGAAGGAGTACGTGACAGAAGTGAAGGTAATAAGCCAATTGAGACATAGGAATTTAGTACAACTTATTGGGTGGTGTCATGAGAAGAATGACTTTATCCTCGTATATGAGTTCATGCCAAATGGAAGCTTAGACTCTCATCTGTATGAAGTGAAAAGCTTCTTAACTTGGATAGTGAGGTATAATATAGCTTTGGGCTTGGCTTCAGCATTGCTTTACTTACAAGAAGAATGGGAGCAGTGTGTGATTCACAGGGATATTAAATCAAGCAACATAATGCTGGATTCAAGTTTCAATGCTAAGCTTGGTGATTTCGGTTTGGCTAGGCTAGTGGACCATGAGAAAGGGTCACAAACGACACATATAGCTGGGACGAGGGGCTATATTGCTCCTGAATATTTCACTTCAGGAAAGGCTACTAAGGAATCTGATATATACAGCTTTGGGGTTGTGTTATTGGAGATAACTAGTGGAAGAAAATCAGTTGAACTAGAAGCTGAGGAGGGTCAAATAACTCTAGTTGAGTGGGTTTGGAAGCTATATGGATTGGGAAGGTTACTTGAAGCAGCTGACCCAAAGTTATGTGGAGAATTTGATGAGAAGCAAATGAAGCGTTTAGTGGTTGTTGGACTTTGGTGTGTTCATCCAGATTACTCATTCAGGCCTTCTATAAGGCAAGTGATTCAGGTCCTTAAATTTGATTCTCCTCTACCCATTCTCCCAGAAATGATGCCTGTGCCAACCTATCTTCCTCCAACAATAAAAGCACTTTTTTCTTCAGTTTCATCCTTCCTTTGGGAAACAAGTTAG 2007 0.3921 MAWWHNIVHNPILFCHAMITIFILQIIPLANSLSFYYPNFKNGDVKWEGDASILKGAIQVTSNTIDQNNNYSVGRVTSYEQMLLWDMKSGKLADFTTKFSFVIFSEKSYYGDGMSFFLADPNLPLLKDIKEGGGLGLVDGEQVLNSTQHPFVAVEFDTFHNKLWDPPGGTHVGLNFNSMKSNITKSWLTDVQIWNVYNCSIKYNSSTLNLSVSFTMYNDSKPLEEYVSYKVDLRDHLPGRVILGFSAATGKLYEVHTLRSWSFSSNLQSDENTNEIKPEAVPPDSYLMPEKGKKIELRVGLGIGLGLVLSLSGLIFTLLWKRSRGRKKELVFNLNMGDVFPKGTGPKSFSYNELASATNKFSESEKLGQGGFGGVYKGYLKDIKSYVAIKRISRESRQGMKEYVTEVKVISQLRHRNLVQLIGWCHEKNDFILVYEFMPNGSLDSHLYEVKSFLTWIVRYNIALGLASALLYLQEEWEQCVIHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTHIAGTRGYIAPEYFTSGKATKESDIYSFGVVLLEITSGRKSVELEAEEGQITLVEWVWKLYGLGRLLEAADPKLCGEFDEKQMKRLVVVGLWCVHPDYSFRPSIRQVIQVLKFDSPLPILPEMMPVPTYLPPTIKALFSSVSSFLWETS* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2215 668 CDD STKc_IRAK 367 631 - -
Pvu2g2215 668 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Pvu2g2215 668 ProSitePatterns Protein kinases ATP-binding region signature. 367 390 IPR017441 GO:0005524
Pvu2g2215 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Pvu2g2215 668 Pfam Protein kinase domain 362 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2215 668 Gene3D Phosphorylase Kinase; domain 1 346 437 - -
Pvu2g2215 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 273 IPR013320 -
Pvu2g2215 668 ProSiteProfiles Protein kinase domain profile. 361 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2215 668 Gene3D - 30 279 - -
Pvu2g2215 668 PANTHER - 17 666 - -
Pvu2g2215 668 Gene3D Transferase(Phosphotransferase) domain 1 438 649 - -
Pvu2g2215 668 SMART serkin_6 361 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2215 668 SUPERFAMILY Protein kinase-like (PK-like) 345 653 IPR011009 -
Pvu2g2215 668 CDD lectin_legume_LecRK_Arcelin_ConA 33 267 IPR001220 GO:0030246
Pvu2g2215 668 Pfam Legume lectin domain 32 274 IPR001220 GO:0030246
Pvu2g2215 668 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 17 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2215 Pvu-Chr2 37741409 37743415 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2215 22 648 Receptor kinase-like Gene Family AT5G10530 47.352 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu2g2215 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2215 - - gmx:100780181 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2077 6 30521384 30523445 Pvu2g2215 2 37741409 37743415 PCT