Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2213 ATGATAGATTCTGTTTGGCGTTTTGGTCTTAAAGCAATCACCCTGGGGTTTTGTTATGCAATGTTTCTCTTGATAATCCCTTTTGCAAAGGCTCATTCACAACCCTTTTCTTTTGATTACAACTTCAGAAATGCTGCTGACGTAGAACAGCTAAACCTGGAAGGAAATGTTTCTGTTTCAAATTCTGGCATCAACCTCGCAGTGGACTCAAACGATGATGGAAGTGGGAGTGTTGGGCGAGTCACAAGTCCCCAGCTTCTTCACCTTTGGAACAAGACCTCGAATGAAATAGAGAGCTTCGTTACCCACTTTTCCTTTATGATCATCTCAAACAAGAGTTCTCGTGGAGACGGTATGACTTTCTTCCTAGCAAACAATCTCTCAAATGTGAATGTTACGGCTGGAATAAAGCGTGGAGGCCTTGGCATTGGCGTGGTGCCTGACAAAGAACTTTTCTCAGTCGGATTGCTTAATTATCAATTTGTGGCGGTGGAGTTTGACACTTTCTCAAACGATTGGGACCCAGTGGGCACACATGTGGGTGTGAATGTAAACTCTATGCAATCTGAGGTAGTTGAGAATTGGAGTACAGATACTACTTCAAAAGGCCCTTATAACTGTAGCATTAAGTACAACTCCCATGATTATTTTCTAAACGTTTCTTTCACTGGATTCGTGCACAATGGAAAGCGAGTAACGCAGTTTCTTCTTCACCCCATTGATTTGAGAGATTACTTACAAGAGTGGGTTACTGTAGGTATATCAGCTGCAACAGGAGATGGATTTGATCAACATACCTTGCTGGATTGGTCATTTAGTAAAAACACAAGCAATGATAAGAAAGACAAGTTTAACAAGATAATGTTGTTGAAGGGAGTAGGAGTTGGTTTAGGCGGGGCTCTGAGTTTCTTTGTGTTGCTCTTCATTGTATTGAGGAAGAGGGGTGAGAGAGAAAAGGAAGAAGCCACTTCAGAAACCTCTTTTGATTTGAAGATGGATGATGAGTTCCAAATGGGCACTGGACCTAAGAAGATCAGATACAAGGTATTGGTATCTGCGACAAACAACTTTAAAGAGAGACACAAGGTGAGGCAAGGTGGTTTCGATTGTGTTTATAAAGGTTATTTCAAAGACCTAAACTTCTATGCTGCAATAAAGAGGATATCAACGGGTTCATCGCATGCTCTGAAGGAATATGCAGCGGAAGTAAGGATCATTAGCCAATTGAGGCACAGGAATTTACTGAAACTCATCGGTTGGAGCCACAAGAAGAGTGATCTCTTTCTGATATACGAGAACATGCCAAATGGCAGCTTATATTCTCATCTTTTTAGTGGAGAGAGTATCTTGTCGTGGCATGTTAGGTACAACATAGCTCTAGGCTTGGCCTCAGCATTGTTTTACCTACAAGAAGAGTGGGAAAAATGTGTGCTTCATGGGGACATCAAATCAAGCAACATAATGTTGGACTCCAATTTCAATGCTAAGCTTGAGGATTTTGGCCTGGCAAGGCTGGTGGATCGTAAGAAAGGGTCACAAACCACAGTTATGGCTGGAACAATGGGTTATCTTGCTCCTGAATATATTAGCACAGGAAAGGCTAGAAAGGAATCTGACATGTTCAGTTTTGGGGTTGTTTTGTTGGAGGTAGCCAGTGGAAGAAAAGCCATTGAGCAAGAAGAGAAAGAGTGTCAAGTATCACTAGTTGAGTGGGTGAGGGAGCACTATAGATTTAGAAATCTGCTTGCAGCAGCTGATCCAAACCTGAATGGGGAATTTGATGTGCAGCAAATGGAATGCTTGCTTGTTGTTGGTCTTTGGTCTGCTAATTCAGAGAGCAAGAGAAGGCCCTCTATTAGGCAAGTGATTAAGGTGCTTAACTTTGAAGCTCCTTTTCCTAATCTCCATCACCACCTATCTCCCTCCAACAACAACAACAGATGA 1944 0.4208 MIDSVWRFGLKAITLGFCYAMFLLIIPFAKAHSQPFSFDYNFRNAADVEQLNLEGNVSVSNSGINLAVDSNDDGSGSVGRVTSPQLLHLWNKTSNEIESFVTHFSFMIISNKSSRGDGMTFFLANNLSNVNVTAGIKRGGLGIGVVPDKELFSVGLLNYQFVAVEFDTFSNDWDPVGTHVGVNVNSMQSEVVENWSTDTTSKGPYNCSIKYNSHDYFLNVSFTGFVHNGKRVTQFLLHPIDLRDYLQEWVTVGISAATGDGFDQHTLLDWSFSKNTSNDKKDKFNKIMLLKGVGVGLGGALSFFVLLFIVLRKRGEREKEEATSETSFDLKMDDEFQMGTGPKKIRYKVLVSATNNFKERHKVRQGGFDCVYKGYFKDLNFYAAIKRISTGSSHALKEYAAEVRIISQLRHRNLLKLIGWSHKKSDLFLIYENMPNGSLYSHLFSGESILSWHVRYNIALGLASALFYLQEEWEKCVLHGDIKSSNIMLDSNFNAKLEDFGLARLVDRKKGSQTTVMAGTMGYLAPEYISTGKARKESDMFSFGVVLLEVASGRKAIEQEEKECQVSLVEWVREHYRFRNLLAAADPNLNGEFDVQQMECLLVVGLWSANSESKRRPSIRQVIKVLNFEAPFPNLHHHLSPSNNNNR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2213 647 ProSiteProfiles Protein kinase domain profile. 357 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2213 647 Pfam Legume lectin domain 36 283 IPR001220 GO:0030246
Pvu2g2213 647 Pfam Protein kinase domain 358 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2213 647 PANTHER - 19 637 - -
Pvu2g2213 647 ProSitePatterns Legume lectins beta-chain signature. 162 168 IPR019825 -
Pvu2g2213 647 SUPERFAMILY Protein kinase-like (PK-like) 341 631 IPR011009 -
Pvu2g2213 647 Gene3D Transferase(Phosphotransferase) domain 1 434 642 - -
Pvu2g2213 647 SMART serkin_6 357 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2213 647 CDD STKc_IRAK 365 627 - -
Pvu2g2213 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Pvu2g2213 647 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Pvu2g2213 647 Gene3D - 34 292 - -
Pvu2g2213 647 PANTHER LECTIN RECEPTOR KINASE 19 637 - -
Pvu2g2213 647 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 278 IPR013320 -
Pvu2g2213 647 CDD lectin_legume_LecRK_Arcelin_ConA 36 273 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2213 Pvu-Chr2 37718850 37720793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2213 22 635 Receptor kinase-like Gene Family AT5G10530 41.214 3.50e-146 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu2g2213 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2213 - - cam:101492002 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g2080 6 30532961 30535141 Pvu2g2213 2 37718850 37720793 PCT