Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2212 ATGGCTTTTTCTTCTCAATTACTTGTTCATTTTGGCTTATTACTCATCCTCCTACACCTTCAGCTACACCACCTCTTCATTGGTGTATCAGCAGCCACTTTAAGCATCACCACAGACACAGAAGCCTTGATCTCATTCAAGTCTCAACTGAGAAATGACACTCTCAATCACTTATCTTCCTGGAACCAAAATTCATCCCCATGCAATTGGACTGGTGTCCAATGTGACAGGCTTGGCCAAAGAGTCACTGCCTTGGAGCTTTCAGGCTTGGGACTCTCAGGTCACTTAAGTCCTTATATTGGTAACCTCTCCTCTCTTCAGTTCCTCCAATTGCAGAATAACCAACTCATTGGACTCATTCCTGACCAAATTGGCAACCTATTCAGTTTGAGAGTTCTAAATATGAGCTTTAATATGTTAGAAGGAAAACTTCCTTCCAACATCACCCACTTGAATGAGCTCCAGATTCTTGATTTATCCTCAAACAAGATTGTCAGCAAGATTCCTGAAGGCATCAGCAGCTTGAAAAAGCTTCAGGCTTTGAAACTGGGAAGGAATAGCCTCTACGGTGCAATCCCAGCATCTCTGGGCAACATTTCTTCTCTCAAAAATATCAGTTTTGGCACCAATTTTCTCTCTGGTTCGATTCCCAGCGACTTGGGTAGGCTGCATGATTTGATTGAGCTTGATATCATTCTTAACAATCTCAATGGAACTGTTCCACCTGTTATATACAACTTATCTTCCCTTGTAAACTTTGCGTTGGCTGGAAACTCTTTATGGGGTGAGATTCCACAGAATGTTGGCCACAAATTTCAAAAGCTTATAGTGTTCAATATCTGCTTCAATTATTTCACAGGTAGAATTCCAGGGTCTTTGCACAACATCACCAACATTCAGGTCATTCGCATGCGTTCCAACCTTTATGAAGGAACACTGCCACCAGGTTTGGGAAATCTCCCATTTCTTCGCATGTATGATACTTCATATAACAGGATAGTTAGTTCGGGTGTCAGAGATCTAGACTTCATCACTTCTCTGACTAACAGCACTCACCTAAAGTTTCTGGCAATTGAGGGAAATATGCTGGAAGGTGAAATTCCTGAAACCATTGGCAATCTCTCCAAGGATCTCACAAATTTATACCTGGGAAGGAATCGTTTCAGCGGAAGCATACCTACCTCCATTGGTCGTCTTAGTGGCTTAGGGGTGTTAAACATAAGCTACAATTCAATCTCTGGAGAAATCCCACATGAATTAGGCCAATTAGCGGAACTACAAGAACTATCTCTAGCTGGAAATGAGATATCAGGGGTTATTCCAGACTCCCTTGGTAACCTCCTCAAGTTAAACCTGATTGATTTGTCAAGAAACAAACTAGTGGGGAGAATACCTACCAGTTTTGGGAATTTGCAAAGTCTACTTTACATGGACTTATCAAGCAACCAACTCAATGAAAGCATTCCTATGGAAATCCTCAATCTCCCAACTTTGAGCAATGTTTTGAATTTGTCAATGAACTCTTTGAGTGGACCAATACCTCAAATTGGGAGATTGAGTGGTGTTGCCTCCATTGACTTTTCTAGCAACCAATTGGATGGTGACATCCCCAGTTCATTCAGCAATTGTCTCAGCTTGGAAAATTTGTTTTTGACCAGGAATCAGCTTTCGGGTTCCATTCCAAAGTCTCTTGGAGAAGTGAGAGGCTTGGAAACTTTGGACCTATCCTCCAACCAACTCTCTGGAACCATTCCTGTTGAACTTCAAAACTTACAGGTGCTTAGGCTCTTAAACCTCTCGTATAATGATTTAGAAGGAGCCATTCCAAGTGGTAGAGTTTTCCAAAATCTCTCTGCCGTACATTTAGAAGGCAATGGAAATCTCTGCTTGCAATCCCCTTGTGTGAATCGTGGCGAAGGAAGAAGAAATGTCCGACATTACATCATCGTAGCCGTTGCAGTAGCATTGGTACTGTGTCTCACAATTGGCTCAATACTATATATAAAGAGCAGAAAGGTGAAGGTATCATCATCATCTGAACAGCTAAAACCTCTTGCGGTAATGATCTCTTATGATGAGCTTCGTTTAGCAACTGAGGAGTTCAACCAGGAAAACTTACTAGGTGTTGGGAGCTTTGGCTCAGTTTACAAAGGCAATCTAAGTTATGGAACTACTGTTGCAGTGAAAGTTCTTGACACCCTGAGAACTGGTTCTCTAAAGAGTTTCTTTGCAGAATGTGAGGCTATGAAGAACTCGAGGCATCGAAATCTAGTTAAGATCATCACATCATGCTCCAGTGTTGACTTCAAAAACAATGACTTTCTGGCTCTGGTGTATGAGTATCAATGTAATGGTAGCTTGGAAGACTGGATTAAGGGGAAGAGAAAGCATGCAAACGGAAATGGGTTGAACCTTATGGAGAGACTGAACATAGCAATAGATGTTGCGTGTGCATTGGAGTACCTGCACAATGATAGTGAAATCCCAGTTGTGCACTGTGATTTGAAGCCTAGCAACATTCTCTTGGACGCAGACTTGACGGCAAAGGTTGGAGACTTTGGATTGGCTAGGTTGCTTATTCAAAGATCAACCAATCAAGTTTCCATTAGCTCCAGTCGTGTTCTTAGGGGTTCAATCGGCTACATACCTCCAGAATATGGATGGGGAGAGAAAGCATGTACAGCTGGAGATGTATATAGTTTTGGCATAGTGTTGCTAGAGTTATTCTCTGGAAAAAGTCCAACTGATGAATTCTTCACTGGAGGCCTAGGCATAAGAAGATGGGTGCATTCAGCATTCAAAGAGAAGACAATGGAAGCCATTGACCCTGAGTTGGTGTCCCTCATTTCGCATGATGACCCTTCAGAGGGACCAAATAACGTACAAGTTTATTGTGTGGATGCAATTCTAGGAGTAGCCATATCTTGCACTGCAGACAACCCAGATGAACGCATTGGCATTAGAGATGCTGTTCTCCAACTCAAAGCTTCCAGAGACTCTTTTGAATCACTCTGA 3015 0.4216 MAFSSQLLVHFGLLLILLHLQLHHLFIGVSAATLSITTDTEALISFKSQLRNDTLNHLSSWNQNSSPCNWTGVQCDRLGQRVTALELSGLGLSGHLSPYIGNLSSLQFLQLQNNQLIGLIPDQIGNLFSLRVLNMSFNMLEGKLPSNITHLNELQILDLSSNKIVSKIPEGISSLKKLQALKLGRNSLYGAIPASLGNISSLKNISFGTNFLSGSIPSDLGRLHDLIELDIILNNLNGTVPPVIYNLSSLVNFALAGNSLWGEIPQNVGHKFQKLIVFNICFNYFTGRIPGSLHNITNIQVIRMRSNLYEGTLPPGLGNLPFLRMYDTSYNRIVSSGVRDLDFITSLTNSTHLKFLAIEGNMLEGEIPETIGNLSKDLTNLYLGRNRFSGSIPTSIGRLSGLGVLNISYNSISGEIPHELGQLAELQELSLAGNEISGVIPDSLGNLLKLNLIDLSRNKLVGRIPTSFGNLQSLLYMDLSSNQLNESIPMEILNLPTLSNVLNLSMNSLSGPIPQIGRLSGVASIDFSSNQLDGDIPSSFSNCLSLENLFLTRNQLSGSIPKSLGEVRGLETLDLSSNQLSGTIPVELQNLQVLRLLNLSYNDLEGAIPSGRVFQNLSAVHLEGNGNLCLQSPCVNRGEGRRNVRHYIIVAVAVALVLCLTIGSILYIKSRKVKVSSSSEQLKPLAVMISYDELRLATEEFNQENLLGVGSFGSVYKGNLSYGTTVAVKVLDTLRTGSLKSFFAECEAMKNSRHRNLVKIITSCSSVDFKNNDFLALVYEYQCNGSLEDWIKGKRKHANGNGLNLMERLNIAIDVACALEYLHNDSEIPVVHCDLKPSNILLDADLTAKVGDFGLARLLIQRSTNQVSISSSRVLRGSIGYIPPEYGWGEKACTAGDVYSFGIVLLELFSGKSPTDEFFTGGLGIRRWVHSAFKEKTMEAIDPELVSLISHDDPSEGPNNVQVYCVDAILGVAISCTADNPDERIGIRDAVLQLKASRDSFESL* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2212 1004 Gene3D Phosphorylase Kinase; domain 1 683 781 - -
Pvu2g2212 1004 SUPERFAMILY L domain-like 377 629 - -
Pvu2g2212 1004 Gene3D Ribonuclease Inhibitor 34 232 IPR032675 -
Pvu2g2212 1004 Gene3D Ribonuclease Inhibitor 234 339 IPR032675 -
Pvu2g2212 1004 SUPERFAMILY L domain-like 37 334 - -
Pvu2g2212 1004 ProSiteProfiles Protein kinase domain profile. 701 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2212 1004 ProSiteProfiles Leucine-rich repeat profile. 153 176 IPR001611 GO:0005515
Pvu2g2212 1004 Gene3D Ribonuclease Inhibitor 340 636 IPR032675 -
Pvu2g2212 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Pvu2g2212 1004 SMART LRR_typ_2 591 616 IPR003591 -
Pvu2g2212 1004 SMART LRR_typ_2 471 495 IPR003591 -
Pvu2g2212 1004 SMART LRR_typ_2 423 446 IPR003591 -
Pvu2g2212 1004 SMART LRR_typ_2 151 175 IPR003591 -
Pvu2g2212 1004 SMART LRR_typ_2 567 590 IPR003591 -
Pvu2g2212 1004 SMART LRR_typ_2 103 127 IPR003591 -
Pvu2g2212 1004 SUPERFAMILY Protein kinase-like (PK-like) 682 994 IPR011009 -
Pvu2g2212 1004 SMART serkin_6 701 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2212 1004 Pfam Leucine rich repeat 545 604 IPR001611 GO:0005515
Pvu2g2212 1004 Pfam Leucine rich repeat 378 436 IPR001611 GO:0005515
Pvu2g2212 1004 ProSiteProfiles Leucine-rich repeat profile. 569 592 IPR001611 GO:0005515
Pvu2g2212 1004 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 1000 - -
Pvu2g2212 1004 CDD STKc_IRAK 707 984 - -
Pvu2g2212 1004 SMART LRR_sd22_2 151 174 - -
Pvu2g2212 1004 SMART LRR_sd22_2 447 473 - -
Pvu2g2212 1004 SMART LRR_sd22_2 567 593 - -
Pvu2g2212 1004 SMART LRR_sd22_2 423 444 - -
Pvu2g2212 1004 PANTHER OS04G0122200 PROTEIN 25 1000 - -
Pvu2g2212 1004 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Pvu2g2212 1004 ProSitePatterns Protein kinases ATP-binding region signature. 707 729 IPR017441 GO:0005524
Pvu2g2212 1004 Pfam Protein kinase domain 702 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2212 1004 PRINTS Leucine-rich repeat signature 570 583 - -
Pvu2g2212 1004 PRINTS Leucine-rich repeat signature 591 604 - -
Pvu2g2212 1004 Gene3D Transferase(Phosphotransferase) domain 1 783 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2212 Pvu-Chr2 37710308 37714731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2212 38 1001 Receptor kinase-like Gene Family AT3G47570 41.717 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pvu2g2212 Pkinase 6.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2212 - - gmx:102664710 1566.21