Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2207 ATGTTGCGGCTTTCGATTCAACGAGTGAGAAAGTTGAACATTATGAGGCCTCAGATCTCTGCACTGGGAAGGTCCCATTTCTCAACTGCTGTTGAATCATCTTCCAGTAAGAGCAATCCACCGAGGGTTCCAAATCTTATTGGGGGCAGTTTTGTTGACTCAAAATCATCAACTGTCATTGATGTTATAAATCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCTACGGATGAAGAGTTTAAGGCAGCTGTATCTGCAGCAAAGAAGGCATATCCATCATGGCGTGACACTCCAATTACAACACGCCAACGTGTTATGTTGAAGCTTCAGGAGCTTATACGCAGAGATATGGACAAACTTGCTCTGAATGTGACCACTGAACAAGGAAAGACGTTGAAGGATGCACAAGGAGATGTATTCCGTGGTTTAGAGGTGGTGGAACACGCTTGTGGGATGGCAACTCTACAAATGGGGGAATATGTTTCCAATGTATCACATGGAATTGACACTTACAGCATTAGAGAACCACTTGGTGTTTGCGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCTGTGGCTATTACTTGTGGTAACACCTTTGTTCTAAAACCATCAGAGAAAGACCCAGGTGCTTCTGTAATGCTTGCAGAATTAGCATTGGAGGCTGGTTTGCCAGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGCGACGATGATAACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGAAAGCGTGTTCAGTCTAACATGGGAGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTCTAGTTGCAGCTGGTTTTGGTGCTGCTGGTCAAAGGTGTATGGCTCTTAGCACAGTTGTTTTTGTTGGAGACGCGAAATCATGGAAAGCTAAACTTGTAGAGCGTGCCAAAGCTCTCAAGGTAAATGCTGGAACTGAACCTGATACAGACCTTGGTCCGGTGATCAGCAAGCAGGCAAAGGAGAGAATACACAGACTAGTTCGATCGGGGGTTGAAAGTGGTGCCAAACTACTGCTGGACGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTCACTGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTCCTTTTCATGGAGGCTGATAGCTTGGAAGAGGCCATAAACATCATCAACAGTAACAAATACGGAAATGGTGCTTCTATATTCACCACATCTGGTGTTTCTGCAAGGAAATTTCAGACTGAGATAGAGGCAGGCCAGGTTGGCATTAATGTTCCCATCCCAGTTCCTTTGCCCTTCTTCTCATTCACTGGCAACAAGGCATCGTTTGCCGGTGATCTCAACTTCTATGGCAAGGCAGGGGTTAACTTCTATACTCAGATCAAGACAATAACACAGCAATGGAAGGATTCAACTGGTGGTAGCAAGATTAACATGGCAATGCCAACCTCCCAAAAATAA 1614 0.438 MLRLSIQRVRKLNIMRPQISALGRSHFSTAVESSSSKSNPPRVPNLIGGSFVDSKSSTVIDVINPATQEVVSQVPLSTDEEFKAAVSAAKKAYPSWRDTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAITCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDNIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATLNALVAAGFGAAGQRCMALSTVVFVGDAKSWKAKLVERAKALKVNAGTEPDTDLGPVISKQAKERIHRLVRSGVESGAKLLLDGRNIVVPGYESGNFIGPTILSDVTANMECYKEEIFGPVLLFMEADSLEEAINIINSNKYGNGASIFTTSGVSARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSKINMAMPTSQK* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2207 537 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 45 519 IPR010061 GO:0004491
Pvu2g2207 537 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 24 537 - -
Pvu2g2207 537 SUPERFAMILY ALDH-like 38 520 IPR016161 GO:0016491
Pvu2g2207 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 496 IPR016162 GO:0016491
Pvu2g2207 537 Pfam Aldehyde dehydrogenase family 51 515 IPR015590 GO:0016491
Pvu2g2207 537 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 24 537 IPR010061 GO:0004491
Pvu2g2207 537 CDD ALDH_F6_MMSDH 43 519 IPR010061 GO:0004491
Pvu2g2207 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Pvu2g2207 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 488 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2207 Pvu-Chr2 37677604 37685270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2207 1 503 Aldehyde Dehydrogenase Gene Family AT2G14170 80.716 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2207 K00140 - gmx:100811544 1009.98