Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2206 ATGTCTTCTCTCTGGTTTCTTAAACTCATCGTCAAATGTCTTGATCATTGTGCATGGCCTCTTCTTGCTTTGGGGTACCCTTTATGTGCTTCTGTACATGCAATTGAGACCGATTCCAACAAAGAAACTAAGGATTTGATATCATATTGGATACTCCTCTCGCTACTATATCTATTTGAGTATGCTTTTTTTAGGCTTCTTCAATGGTTCCAGTTCTGGCCTTACACTAAGCTAATGATCATCCTCTGGCTCATCCTACCGGACTTTGAACGAGCTTCTTATGCCTACAATAATATTATTCGCAAATGCTTCTCAAATCCACAAGCAGCCATACGTAGTTTAAATAACTGGAGGAAGTTTTTTGTCAAGAAAGATAACTTTTTACTGCATGCAGAGAAATATGTAGAAGAGAATGGAGCAGAAGCCTTAATGAAACTCATTGCTAGCAAGAACACGACTTGCAAACCTGTCGCAGAAGCAACAAATGCAAGTAGAGTTACTGACCATGAAGAAATGCAAAAGACAAATGAGAAAAATCACCAAACAGAGCGCAAAGCCACCAAAGTTTTGGAGGTGATCGAAAAAAATGAAATTCCTACAGGCAATCAAGATATTCCTGTGGTGCCTAAAGTTGTGCAAAGTCAGAATGCTTCACCAACAATGTTGGAAACTAAAGGAGTAGTGATGAAAGATAAGGCTGATGGAGAGCTTCCTCAGATTTCTATACATAAGGAAGTTCAGAAGGAGTGGACTTGCGCTTTATGCCAGGTGACAACAACGAGCGAGAAAACCTTGAATGAACACCTGAAAGGGAGCAAACACAGGGCTAAGGAGAATGATATGAAGGCAAAGTTTCAACCTGTTTCACAGAAGCTGAAAAGTGATCATTCCAAAGAGGAAATGAAACAGAAGAACATCAACCATGAGCTAAATTCCAAGACCAAGAATGGAGAGAAACTGCAAAAGAAACCTGCTGGGACGAATAATTCGAAAATAAGATGTGAAGTCTGTAATGTGAAATGCTCTAGCGAGATGGCCTTGGCCTCTCACAGATATGGGAAGAAGCATTTGGCTAAAATTGCAAGTTTAAATCTGAAGTGTGTGAATAACAGGTAA 1116 0.397 MSSLWFLKLIVKCLDHCAWPLLALGYPLCASVHAIETDSNKETKDLISYWILLSLLYLFEYAFFRLLQWFQFWPYTKLMIILWLILPDFERASYAYNNIIRKCFSNPQAAIRSLNNWRKFFVKKDNFLLHAEKYVEENGAEALMKLIASKNTTCKPVAEATNASRVTDHEEMQKTNEKNHQTERKATKVLEVIEKNEIPTGNQDIPVVPKVVQSQNASPTMLETKGVVMKDKADGELPQISIHKEVQKEWTCALCQVTTTSEKTLNEHLKGSKHRAKENDMKAKFQPVSQKLKSDHSKEEMKQKNINHELNSKTKNGEKLQKKPAGTNNSKIRCEVCNVKCSSEMALASHRYGKKHLAKIASLNLKCVNNR* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2206 371 PANTHER HVA22-LIKE PROTEINS 1 302 IPR004345 -
Pvu2g2206 371 SMART ZnF_U1_5 329 363 IPR003604 GO:0003676|GO:0008270
Pvu2g2206 371 SMART ZnF_U1_5 247 281 IPR003604 GO:0003676|GO:0008270
Pvu2g2206 371 SMART c2h2final6 250 274 IPR013087 -
Pvu2g2206 371 SMART c2h2final6 332 356 IPR013087 -
Pvu2g2206 371 Pfam Zinc-finger of C2H2 type 250 274 - -
Pvu2g2206 371 Pfam Zinc-finger of C2H2 type 333 356 - -
Pvu2g2206 371 MobiDBLite consensus disorder prediction 266 326 - -
Pvu2g2206 371 MobiDBLite consensus disorder prediction 266 320 - -
Pvu2g2206 371 PANTHER TB2/DP1, HVA22 FAMILY PROTEIN 1 302 - -
Pvu2g2206 371 SUPERFAMILY beta-beta-alpha zinc fingers 322 361 IPR036236 -
Pvu2g2206 371 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
Pvu2g2206 371 Gene3D Classic Zinc Finger 314 366 - -
Pvu2g2206 371 Gene3D Classic Zinc Finger 229 280 - -
Pvu2g2206 371 SUPERFAMILY beta-beta-alpha zinc fingers 238 283 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2206 Pvu-Chr2 37672536 37676636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2206 211 364 C2H2 Transcription Factor Family AT2G19380 25.161 2.55e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2206 - - pvu:PHAVU_002G214600g 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2206 2 37672536 37676636 Pvu2g2206 2 37672536 37676636 ECH