Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2183 ATGGACGGCGGAGGAAACCGAGCGGAGGCGGAGCGGTGGCTCTACACCGCCAACAAGCTGCTTAGCGCACGCGACCTTCACGGGGCGCGCTCCTTCGCGATCCGAGCGCGAGAGTCCGACCCGACTTACGAGGCCTCCGAGCACCTCCTGACCGTGATCGACACGCTCCTGGCGGGAGAGTCGCGAATCAACGACCACCGTGACTGGTACGGGATCCTCCAAATCCTCCGCTACACCACCAACATGGACCACGTTGCCTCTCAGTACCGCCGCCTCGCCCACCTCCTCGATCCCAGCCGCAACCTCTTCGCCTTCGCCAACCACGCCTTTTCCCTTGTCAACGACGCCTGGTCTGTACTTTCCAACCCAGCCAAGAAAGCCATGTACGACAGCGATCTCCGGCTGCTCACCACTCCACCGCCGCAGTCCCCGCCGCGTCCTCCTCCTCCTGTACATTCCCAACCCACGTCCAGGCGAAACCCTAGATCGAGGGCTAACTCGGCCGAGGCGACTCGGCCGAACTCCAATCGTCCCGAGTCCGCTGAGTCTACTCGAACCATCGGAAACGACGGGGTAACGAGTTTCTGGACCTCGTGCCCTTACTGTTACGTTTTGTATGAATACCCGAAGGGGTACGAGGAGTGTACCTTGAGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGGTCGCCACCGCCGTTGACTGGGAAAGACGGTTCCTATTGTAGTTGGGGGTTTTTCCCGTTGGGATTTTCTGGGAATTCGAAGGACGTGAACGGGTTATCCTCCAATTGGAACCCGTTTTCCCCTTTGTTTCCTTGCCCTTCGAATGGGCCGTCCTATAGCAAGCCTAAGAAGAATTGGGCTTACTATGATGACGAGGCTGCCGCCGCGTTTATCGACTTATCCGACCCCAGTGACGATGATTCCGGTGATGGAGACTGGAGGGTTGGGAAGAGGAGGGGGAAGAAGAGGACTAGAGTTAATAAAAATTCTGGTGATGCAAGGAGGGAAACAGTGGAGAGACCTGGGAGGGGTGTCCATACAGAGCATGAGAATGTGGGTTCCGCTAATCCTGTTACAGCTGCTAGTGCCAATGCTAATGCCAAAGCTAATGCTAATGCTAATGCTAGTGCCAAAGCTAATGCTGGCTCTGCTTTGCCGTCTGGTGCGAGGGCAGAGTCTAGTAAGAAGGCTGCGTTAGGTGGTTCGAGGAGGAGGGGTGCTGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAGGAGCCTTCCCGTGGAGTGCGCGATCGCGAAGGGAATGCTGCTGGACATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAAGGCCTTGATGAGTTCCTCAGTAGCTTGCCCATTCTCAATGTTGTGGCAGATGATAAGGTTAAGGGTCACTAG 1443 0.5599 MDGGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTYEASEHLLTVIDTLLAGESRINDHRDWYGILQILRYTTNMDHVASQYRRLAHLLDPSRNLFAFANHAFSLVNDAWSVLSNPAKKAMYDSDLRLLTTPPPQSPPRPPPPVHSQPTSRRNPRSRANSAEATRPNSNRPESAESTRTIGNDGVTSFWTSCPYCYVLYEYPKGYEECTLRCQSCRRGFHAVVIRSPPPLTGKDGSYCSWGFFPLGFSGNSKDVNGLSSNWNPFSPLFPCPSNGPSYSKPKKNWAYYDDEAAAAFIDLSDPSDDDSGDGDWRVGKRRGKKRTRVNKNSGDARRETVERPGRGVHTEHENVGSANPVTAASANANAKANANANASAKANAGSALPSGARAESSKKAALGGSRRRGAGNLGKLDLNVEFSNEVEEPSRGVRDREGNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2183 480 MobiDBLite consensus disorder prediction 138 155 - -
Pvu2g2183 480 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Pvu2g2183 480 Pfam DnaJ domain 68 130 IPR001623 -
Pvu2g2183 480 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Pvu2g2183 480 MobiDBLite consensus disorder prediction 156 187 - -
Pvu2g2183 480 SMART dnaj_3 67 125 IPR001623 -
Pvu2g2183 480 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 3 480 - -
Pvu2g2183 480 MobiDBLite consensus disorder prediction 305 362 - -
Pvu2g2183 480 Gene3D DnaJ domain 62 137 IPR036869 -
Pvu2g2183 480 MobiDBLite consensus disorder prediction 423 445 - -
Pvu2g2183 480 CDD DnaJ 68 122 IPR001623 -
Pvu2g2183 480 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Pvu2g2183 480 MobiDBLite consensus disorder prediction 331 352 - -
Pvu2g2183 480 MobiDBLite consensus disorder prediction 386 445 - -
Pvu2g2183 480 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 480 - -
Pvu2g2183 480 MobiDBLite consensus disorder prediction 134 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2183 Pvu-Chr2 37438768 37440210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2183 9 479 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.798 5.22e-108 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2183 - - var:108324594 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2183 2 37438768 37440210 Pvu6g2097 6 30665335 30667454 PCT