Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2167 ATGATGAGTTCCGTTCACAGTGATTTTCTCATACAAGAAGATAATATTTTAGAGGGGACGAAAACAGAAACTACTCTACATATGCTCATGGCAGAAGAAGCTGAAGGTGATGACACCAAGTCAATAGAAATGAGTGTAAGAGTTCAGGGAGAGAAGGAGGACATAACAGTGACATGGGACAATTTGTGGGTCACTGTTTCAAGTGGAAAGAAAAAGAAGCCAATTCTGCAGGGTCTCACAGGTTATGCAAGCCCAGGGAGGATTCTGGCCATAATGGGCCCTTCAGGATGTGGAAAATCTACACTTCTTGATAGTTTAGCAGGAAGATTGAGCTCAAAAATGAAGCATACAGGGAAGATTCTAATCAATGGCCAGAAACAAACACTGGCCTATGGGACATCAGGCTATGTAACACAAGAAGATGCTATGCTGTCAACTTTAACAGCTGGGGAAACTTTATACTACTCTGCTCAGCTCCAGTTTCCAGATTCCATGTCCACAGCAGAGAAGAAGGAACAAGCAGATATCACACTCAGAGAAATGGGTCTGCAAGGTGCCATTAATACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTGAGTGGGGGACAAAAGAGGAGACTTAGCATTTGCATTGAGATTCTAACAAGGCCAAGACTCCTCTTCCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAGTAGAATTGCAACTCTAAATCTAAGAGATGGAATTCGAAGGACCATTGTTGCTTCCATCCATCAGCCTAGCAGTGAAGTTTTCGAACTTTTTCATGACCTCTGTCTTTTGTCTTCAGGTGAAACTGTATATTTTGGTCCAGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCATGCCCAACTCTCCACAATCCTTCTGATCACTACTTAAGGATGATAAATAAAGATTTCGAACAGGATGCTGAAGAAGGCTTTGGTAAGGGAGTAAGTACAGAAAAAGCAATTGATACCCTTGTAAAGTCTTACAGGCTGTCTCAAGTACGAAAACAAGTTAAAAGGGAAATGCAAAAAATAGTTGAATGTGATTCTTGTGAAAAAAGGAAGAGGATTCATGCTGCATTTCCTACTCAATGCTTTGTTCTTATCAGAAGATCTTCATTGCAGTTCTTTCGTGACATAAGCAATTACTGGCTACGTTTAATTGTCTTTATTGTAATAGCTATAAGCATTGGATCTATCTTCTATAACATAGGCACAGACAATGGATCTATTCAGGGGAGAGGTTCGCTGCTCATATTTTTTGTTTCAGTTCTGACTTTCATGACCCTTGTTGGTGGATTTTCTCCACTCTTGGAGGAAATGAAGGTATTTGAACGAGAGAGATTAAATGGGCACTATGGTATCACAGCATTTCTCATAGGCCACACATTCTCTGCTGTTCCTTACATGGTAATGATCTCTCTTATTCCTGGAGGAATAGCTTATCACCTTTGTGGGTTGCACAAAGGATTAGATCGTTTCTTCTACTTCACTTGTTTGCTATTTGGCATAGTGATGTGGGTTGAGAGCCTTATGTTGGTGATTGGGAGCATCTCCCCGAACTATGTAATAGGCATGTTCCTTGCTGGTGGAGTTGAAGGACTCATGATCGTAACAGGTGGATTCTATAGACTGCCAAATGATCTTCCCAAGCCATTATGGAAGTACCCTTTCTACTATGTTTCCTTCCTCAAGTATGCACTCCAAGGATCCTTCAAGAATGACTTTGATGGACTAACATTTTCAGTAAACCCTGATGGAGGAGGCACTGCAAGCATGAGTGGTAGAGAAGTTCTAGCTCACACATGGCACGTGGAAATGAATCACTCTAAGTGGGTTGATCTTGCAATCATGTTTGGAATGATTGTTCTCTATCGAGTTCTGTTCTTGGTCATCACCAAGTTCAAGGAGAAGTTCAAGCCTTTTCTTGCATCCATTACTCTTCGACCATGA 1995 0.4135 MMSSVHSDFLIQEDNILEGTKTETTLHMLMAEEAEGDDTKSIEMSVRVQGEKEDITVTWDNLWVTVSSGKKKKPILQGLTGYASPGRILAIMGPSGCGKSTLLDSLAGRLSSKMKHTGKILINGQKQTLAYGTSGYVTQEDAMLSTLTAGETLYYSAQLQFPDSMSTAEKKEQADITLREMGLQGAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIATLNLRDGIRRTIVASIHQPSSEVFELFHDLCLLSSGETVYFGPASDANQFFASNGFPCPTLHNPSDHYLRMINKDFEQDAEEGFGKGVSTEKAIDTLVKSYRLSQVRKQVKREMQKIVECDSCEKRKRIHAAFPTQCFVLIRRSSLQFFRDISNYWLRLIVFIVIAISIGSIFYNIGTDNGSIQGRGSLLIFFVSVLTFMTLVGGFSPLLEEMKVFERERLNGHYGITAFLIGHTFSAVPYMVMISLIPGGIAYHLCGLHKGLDRFFYFTCLLFGIVMWVESLMLVIGSISPNYVIGMFLAGGVEGLMIVTGGFYRLPNDLPKPLWKYPFYYVSFLKYALQGSFKNDFDGLTFSVNPDGGGTASMSGREVLAHTWHVEMNHSKWVDLAIMFGMIVLYRVLFLVITKFKEKFKPFLASITLRP* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2167 664 CDD ABCG_EPDR 55 284 - -
Pvu2g2167 664 Pfam ABC-2 type transporter 377 588 IPR013525 GO:0016020|GO:0140359
Pvu2g2167 664 Gene3D - 55 382 IPR027417 -
Pvu2g2167 664 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 302 IPR003439 GO:0005524
Pvu2g2167 664 Pfam ABC transporter 77 227 IPR003439 GO:0005524
Pvu2g2167 664 SMART AAA_5 85 278 IPR003593 -
Pvu2g2167 664 Pfam ABC-2 type transporter 259 315 IPR043926 GO:0140359
Pvu2g2167 664 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 33 656 - -
Pvu2g2167 664 ProSitePatterns ABC transporters family signature. 199 213 IPR017871 GO:0005524
Pvu2g2167 664 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 33 656 - -
Pvu2g2167 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2167 Pvu-Chr2 37121772 37127029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2167 75 237 Calmodulin-binding Proteins AT2G36910 33.918 1.54e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2167 K05681 - gmx:100790102 1079.7