Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2166 ATGGAAGAAGAGAAGGAAATAACTTTGACATGGGAGAATTTGGAGGCTAGTGTTACAGGTGGAAAGAGTAGAAAAATAATTCTGAATGGTCTTACAGGTTATGCCCAACCAGGGAAGCTTTTGGCTATTATCGGTCCTTCAGGCTGTGGCAAATCAACACTTCTTGATGCTTTAGCAGGAAGACTGGGATCGAACATGAAGCAAACGGGAAAGATTCTAATCAATGGCCACAAACAAGAACTGGCGTACGGAACATCAGGCTATGTGACACAAGATGATGCGATGCTGTCATGTTTAACAGCTGGGGAAACTTTGTACTACTCAGCTCAGCTGCAATTTCCAAACACCATGTCTGCAGCTGAGAAGAAGGAACGAGCAGATGCTACGCTCAGAGAAATGGGTCTGCAAGATGCCATCAACACAAGGGTTGGAGGGTGGAGTTGTAAGGGTCTGAGTGGGGGACAGAAGCGGAGACTTAGCATATCTGTTGAGATTCTAACACATCCAAGACTCCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAGTGGGATTGCAGGTCTCAATCTAAAGGATGGAATTCAAAGAACTATTGTTGCCTCCATCCACCAGCCAAGCAGTGAGGTTTTCCAACTTTTTCATGATCTTTGTCTTCTGTCTTCAGGAGAGACAGTATATTTTGGATCTGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTTCCCTGCCCACCCCTCTACAATCCTTCCGATCATTACCTAAGGATCATAAACAAAGATTTCAATCAGTATATTGACGAAGGTATTACCACTGAAGAAGCAACTAATATCCTTGTCAGTTCATATAAATCGTCTGAATATAGAAATCACGTTCAGAATGAAATAGCACAAAGAAGTGAAAAAGATTCCGGTGCAGTTGGAAGGAAGAAGATCCACGGTGCATTCCTTACTCAGTGTCTGGTTCTTCTGAAAAGATCTTCGAAGCAAATCTATCGTGATATAAGCAATTACTGGTTACGTCTAATTGTCTTTATCGCAGTATCTGTAAGCATGGGCTCTATCTTCTATCACATTGGCCCAAGTATGAGATCAATTCAGGAAAGAGGATCGCTTCTTTGTTTTTTCGTTTCAGTTCTGAGTTTCATGACACTTGTCGGTGGATTCTCTCCATTAATTGAGGAAATGAAGGTGTTTAACCGAGAGAGATTGAATGGACATTATGGTATAACAGCTTTTGTGGTAGGGAGCACATTTTCTGCTGTTCCTTACACACTGATGATATCTTTGATTCCTGGAGCTATTGTTACTTATCTTTCTGGACTACACAAAGGAGTAGAAAACTTTCTGTACTTTGCCTCTGTCCTATTTGCTATTGTGATGTGGGTTGAGAGCCTTATGATGGTTGTTGGGAGCATTTTTCCAAATTTTGTGATGGGTGTGATCACTGCTGGTGGGGTTGAAGGACTCATGATTTTGACAAGTGGATTCTATAGACTTCCAAATGATCTTCCCAAACCATTATGGAAATACCCTTTTTACCATGTTTCCTTCCTCACCTATGCTCTCCAAGGATTGTTAAAGAATGAATTTGAAGGCTTGATATTTTCTTCGGATGAGGGTGGAGGTGCCAAAAGTGTTAGTGGTAGAGATATACTGGTTGAGACATGGCATGTGCAAATGGGTCACTCAAAGGGGGTTGATCTTGCTATCATGTTTGGTATGATTGTCCTCTATAGAGTTCTATTCTTGATCATCACTAAATGCAAGGAGAAGTTGAAACATGTTCATGTTGGCACTAATGCTCCTCAAGCAAAAGTTTTCTCAAGAACTCACATCACTGAACGAGATAACCAATTGATATGA 1890 0.4111 MEEEKEITLTWENLEASVTGGKSRKIILNGLTGYAQPGKLLAIIGPSGCGKSTLLDALAGRLGSNMKQTGKILINGHKQELAYGTSGYVTQDDAMLSCLTAGETLYYSAQLQFPNTMSAAEKKERADATLREMGLQDAINTRVGGWSCKGLSGGQKRRLSISVEILTHPRLLFLDEPTSGLDSAASYYVMSGIAGLNLKDGIQRTIVASIHQPSSEVFQLFHDLCLLSSGETVYFGSASDANQFFASNGFPCPPLYNPSDHYLRIINKDFNQYIDEGITTEEATNILVSSYKSSEYRNHVQNEIAQRSEKDSGAVGRKKIHGAFLTQCLVLLKRSSKQIYRDISNYWLRLIVFIAVSVSMGSIFYHIGPSMRSIQERGSLLCFFVSVLSFMTLVGGFSPLIEEMKVFNRERLNGHYGITAFVVGSTFSAVPYTLMISLIPGAIVTYLSGLHKGVENFLYFASVLFAIVMWVESLMMVVGSIFPNFVMGVITAGGVEGLMILTSGFYRLPNDLPKPLWKYPFYHVSFLTYALQGLLKNEFEGLIFSSDEGGGAKSVSGRDILVETWHVQMGHSKGVDLAIMFGMIVLYRVLFLIITKCKEKLKHVHVGTNAPQAKVFSRTHITERDNQLI* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2166 629 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 9 254 IPR003439 GO:0005524
Pvu2g2166 629 Pfam ABC-2 type transporter 211 306 IPR043926 GO:0140359
Pvu2g2166 629 Pfam ABC-2 type transporter 326 539 IPR013525 GO:0016020|GO:0140359
Pvu2g2166 629 ProSitePatterns ABC transporters family signature. 151 165 IPR017871 GO:0005524
Pvu2g2166 629 Gene3D - 1 248 IPR027417 -
Pvu2g2166 629 CDD ABCG_EPDR 7 236 - -
Pvu2g2166 629 Pfam ABC transporter 29 179 IPR003439 GO:0005524
Pvu2g2166 629 SMART AAA_5 37 226 IPR003593 -
Pvu2g2166 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 245 IPR027417 -
Pvu2g2166 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 624 - -
Pvu2g2166 629 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 5 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2166 Pvu-Chr2 37111629 37114585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2166 27 193 Calmodulin-binding Proteins AT2G36910 30.460 1.40e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2166 K05681 - gmx:100820615 990.334