Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2165 ATGGATAGCATTGGTGATGAATCTGTTTCACCTGCTGCTAGACGTGTGATGAACATTGAAGCCTCCACTCTAGAAGTGGAAGCAACAAAGATGAATGGTGGAAGTGAGGGTGTCTGCTTGACATGGAAGGATGTGTGGGTGACTGCTTCCAACAGAAACAATGGAAGCAAATCAATTCTTGAGGGTCTCACTGGTTATGCTAAACCAGGGCAACTCTTGGCAATAATGGGTCCCTCTGGCTGTGGTAAATCTACTCTGCTTGATACTTTAGCAGGGAGATTAGGTTCAAAGATGAGGCAAACCGGGGAGATTCTGATCAATGGACACAAACAAATATTGACTTATGGAACCTCAGCATATGTGACACAAGATGATACCTTGTTGACAACCTTAACGGTTGGAGAAGCAGTGCACTATTCTGCTCAACTCCAGTTACCTGACACCATGTCAAAACAAGAGAAGAAAGAGAGAGCAGACTTTACAATAAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGATGGGGTTGTAAAGGGATCAGTGGGGGTCAGAAAAGGAGAGTTAGCATCTGCATTGAGATCCTAACACGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAAAAGAATCGCTTCCCTTGCTCAAAATGACCACATTAAGAGGACTGTTATTGCTTCAATCCATCAACCCAGTAGTGAAGTTTTTCAACTCTTCAATAACCTTTGTCTTTTGTCTTCGGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCAACTGAGTTCTTTGCTTCATATGGCTTTCCTAGTCCTTCTCTCATGAATCCGTCTGATCATTTACTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAAGTGGGTATATCTGGATCTAGAAACTTACCCACAGAAGAAGTAATTGACATCCTTGTGAGCTCATACAAAAACTCTGAAAGGAATCAAGAAGTTCAAAGTGAAGTAGCCCTACTGTCTAAGAAGGTTACAAGTTCATTGGATGTGAAGAGAAGGCATGCTGGCTTCCTTAATCAGTGCTTTTCTCTTACCCAAAGATCGTCCATTAACATGTATCGTGATCTCGGCTATTATTGGTTACGCATGGCCATATATGTTGTATTGGCTATAAGTTTAGCAACTGTTTTCTATAATTTGGGCACAAGTTATGACTCTATTAAGGATCGAGGTTCGCTTATTGCATTCATCAATGGATTCCTCACTTTCATGACCATTGGTGGATTCCCTTCCTTCGTGGAAGTCATGAAGGTATTTCAGCGAGAAAGAGAAAACGGACATTATGGTGTGAGTGCATTTGTGATTGGGAACACGTTATCATCTATCCCGTTCTTGGTATTGGTTACATTAATTCCTGGAGTTATAGCTTACTTCCTTCCGGGTCTTCAGAATGGATGCGAGCACATAGTGTATTTCATTTGTGTTTTATTTTCTAGTCTGATGTTAGTGGAGAGCCTTATGATGATAGTTGCAAGCATTGTTCCCAACTATCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGAATCATGCTTTTACTCAGTGGCTTCTTTAAATTGCCAAACGATATTCCCAAACCAGTTTGGAAATACCCTTTGCACTACATTGCTTTTCATACCTTTGCCAACCAAGGAATGTTCAAGAACGAGTATGAAGGACTGAGATTTGCTACCAACCATGGAGGAGCCTCACACACTTACACCACTGGTGAAGAGGTTTTGAGAAATATATGGCAAGTTGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGTTGGGGATGATTGTTCTATATCGACTTTTATTTTTGGTTATCATCAAGATTCAAGAGAAGTTGAAGACCTTTGTTTTATCACTATCTTCCAAGAGATCATCACAAATCATGGCAAACCCCAACGCCACTCCTTCACGTTGA 1995 0.408 MDSIGDESVSPAARRVMNIEASTLEVEATKMNGGSEGVCLTWKDVWVTASNRNNGSKSILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSKMRQTGEILINGHKQILTYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKQEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIASLAQNDHIKRTVIASIHQPSSEVFQLFNNLCLLSSGKTVYFGPASAATEFFASYGFPSPSLMNPSDHLLKTINKDFDQDIEVGISGSRNLPTEEVIDILVSSYKNSERNQEVQSEVALLSKKVTSSLDVKRRHAGFLNQCFSLTQRSSINMYRDLGYYWLRMAIYVVLAISLATVFYNLGTSYDSIKDRGSLIAFINGFLTFMTIGGFPSFVEVMKVFQRERENGHYGVSAFVIGNTLSSIPFLVLVTLIPGVIAYFLPGLQNGCEHIVYFICVLFSSLMLVESLMMIVASIVPNYLMGIITGAGIQGIMLLLSGFFKLPNDIPKPVWKYPLHYIAFHTFANQGMFKNEYEGLRFATNHGGASHTYTTGEEVLRNIWQVDMSYSKWVDLAILLGMIVLYRLLFLVIIKIQEKLKTFVLSLSSKRSSQIMANPNATPSR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2165 664 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 40 286 IPR003439 GO:0005524
Pvu2g2165 664 Pfam ABC transporter 62 211 IPR003439 GO:0005524
Pvu2g2165 664 Gene3D - 40 289 IPR027417 -
Pvu2g2165 664 Pfam ABC-2 type transporter 365 576 IPR013525 GO:0016020|GO:0140359
Pvu2g2165 664 SMART AAA_5 69 258 IPR003593 -
Pvu2g2165 664 Pfam ABC-2 type transporter 243 344 IPR043926 GO:0140359
Pvu2g2165 664 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 14 662 - -
Pvu2g2165 664 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 14 662 - -
Pvu2g2165 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 278 IPR027417 -
Pvu2g2165 664 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2165 Pvu-Chr2 37088384 37092305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2165 59 247 Calmodulin-binding Proteins AT2G36910 28.718 2.57e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2165 K05681 - gmx:100794527 1071.23