Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2164 ATGGGTTCTCTTCTTCTATATAATTCAGCTGGTCCTAGTGATTATGAAACTAAACCTAACTCATCAAGGGTTGAAGGCCCTACTACAATGGAGATAGAAGAAGCATGCAGTGCTCCAAAAGCAAAAGGGAGCAAAAGAGGAGAAAGTTCAGGTTGGAGAGAAGAGGAAGGTATGTGTTTGACATGGAAAGATGTATGGGTGACAGCTTCTGTGGGAAACAATGGAAGCAAATCAATTCTGCAGGGCCTCACTGGTTATGCCAAGCCAGGGCAGCTCTTGGCCATAATGGGTCCTTCTGGTTCTGGAAAGTCCACACTTCTTGATGCCTTAGCTGGGAGACTAGGTTCCAACACAAGGCAAACTGGGGAGATTCTTGTCAATGGGAATAAACAAGCACTGGCATATGGAACCTCAGCATATGTGACACAAGATGATACCTTGTTGACAACCTTAACGGTTGGAGAAGCAGTGCACTATTCTGCTCAACTCCAGTTACCTGACACCATGTCAAAACAAGAGAAGAAAGAGAGAGCAGACTTCACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGAATTGGAGGATGGGGTTGTAAAGGGATTAGTGGGGGTCAGAAAAGGAGAGTTAGCATCTGCATTGAGATCCTAACACGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATTGCTACACTTGATAAAAGAGACGACATTCACAGAACTGTTATTGCCTCAATACATCAACCTAGCAGTGAAGTTTTTCAACTCTTCAACAACCTTTGTCTTCTATCTTCAGGTAGAACTGTTTACTTTGGACCTGCTTCGGCTGCAAGTGAGTTCTTCGCTTCAAATGGTTTTCCTTGTCCTTCTCTCATGAATCCATCTGATCATATGCTGAAAACCATAAACACGGATTTCGATCAAGACAATGAGTTAGGAGGGAATGAAACAATACCCACCACAGAAGTGATTCAAATCCTTGTAAATTCGTACAAGTCCTCTGAAATGCACCAAGATGTTGAGAAAGAAGTAGCAGAACTAACTGAAAAGGACAGTTGTTCAACAAACAAGAAGAGAAGTCATGCTGGCTTCCTTAGTCAGTGTTTTGCTCTTACCAAAAGATCATCCATTAACATGTATCGTGATCTCGGCTATTACTGGTTACGCCTTGGCATATATATTGCATTGGCTATAAGTTTAGCCACTATTTTCTATGATCTGGGTACAAGTCAACGCTCAATCCAGGATAGAGGTTCATTCCTTATGTTTGTATCTTCATTCATAACTTTCATGACCATTGGCGGATTCCCTTCCTTTGTGGAGGACATGAAGGTGTTTGAACGTGAGAGACTAAATGGACATTACAGTGTGAGTGCATATGTGATTGGGAACACCTTTTCATCAATCCCATTCTTGCTTTTGGTTTCAGTAATTCCTGGATCTATAGCCTATTACCTTCCAGGTCTTCAGAAAGGCTTTGAACACTTTGTATATTTCATCTGTGTTCTCTTTTCATGTCTGATGTTGGTAGAGAGCCTTATGATGATAGTTGCAAGCATTGTCCCCAACTTTCTAATGGGCATCATAACTGGAGCTGGAATTCAAGGAATGATGATTTTGGGTGGTGGGTTCTTCAGATTACCAAGCGATCTTCCAAGGCCATTTTGGAAATACCCAATGTTCTATTTTGCATTCCATAGATATGCGTACCAAGGATTGTTCAAAAACGAGTTTATAGGACTGAGATTCGCTTCAGATAATGTCCAAGGTGGCTCCTACGTTACTGGTGAAGAAGTTCTGACAAATACATGGCAAGTAAACATGAGTTACTCAAAGTGGGTTGATCTTGGAATCTTGGTGGGGATGATTATTCTGTATAGAGTTCTCTTCTTGGTTAACATCAAAACTACTGAGAAGCTGAAGCCAATCATTGTATCGTTCATGTCATCAAGAAATTCTCCCAAGCGAACAGTATCTATCATGCAGAATCCCAATGCCACTCCTCTTCAAGAAGTTCAAGTTATCTAA 2076 0.4118 MGSLLLYNSAGPSDYETKPNSSRVEGPTTMEIEEACSAPKAKGSKRGESSGWREEEGMCLTWKDVWVTASVGNNGSKSILQGLTGYAKPGQLLAIMGPSGSGKSTLLDALAGRLGSNTRQTGEILVNGNKQALAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKQEKKERADFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIATLDKRDDIHRTVIASIHQPSSEVFQLFNNLCLLSSGRTVYFGPASAASEFFASNGFPCPSLMNPSDHMLKTINTDFDQDNELGGNETIPTTEVIQILVNSYKSSEMHQDVEKEVAELTEKDSCSTNKKRSHAGFLSQCFALTKRSSINMYRDLGYYWLRLGIYIALAISLATIFYDLGTSQRSIQDRGSFLMFVSSFITFMTIGGFPSFVEDMKVFERERLNGHYSVSAYVIGNTFSSIPFLLLVSVIPGSIAYYLPGLQKGFEHFVYFICVLFSCLMLVESLMMIVASIVPNFLMGIITGAGIQGMMILGGGFFRLPSDLPRPFWKYPMFYFAFHRYAYQGLFKNEFIGLRFASDNVQGGSYVTGEEVLTNTWQVNMSYSKWVDLGILVGMIILYRVLFLVNIKTTEKLKPIIVSFMSSRNSPKRTVSIMQNPNATPLQEVQVI* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2164 691 Gene3D - 60 298 IPR027417 -
Pvu2g2164 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 306 IPR003439 GO:0005524
Pvu2g2164 691 SMART AAA_5 89 283 IPR003593 -
Pvu2g2164 691 MobiDBLite consensus disorder prediction 13 27 - -
Pvu2g2164 691 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 28 685 - -
Pvu2g2164 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 28 685 - -
Pvu2g2164 691 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524
Pvu2g2164 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 295 IPR027417 -
Pvu2g2164 691 MobiDBLite consensus disorder prediction 1 27 - -
Pvu2g2164 691 Pfam ABC transporter 81 231 IPR003439 GO:0005524
Pvu2g2164 691 Pfam ABC-2 type transporter 263 373 IPR043926 GO:0140359
Pvu2g2164 691 Pfam ABC-2 type transporter 383 594 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2164 Pvu-Chr2 37071022 37076795 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2164 90 267 Calmodulin-binding Proteins AT2G36910 30.270 9.85e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2164 K05681 - gmx:100813462 1150.58