Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2161 ATGCAAGGAAAACCAGATCCCTCCGCCACCTACCCTCTGTCATATACACAATCAAACATGATATTGATGGAAACCCCCAATTGTAGTCCTGCTCCTTTGATTATGCAGTCCAACCATGAGTTTGTTGCCACTGTTGAGGAAGAAAGAAACACAAGTACTAAGAGAAAGGAAGAAAGGATCTTCCTGACATGGGAAGATTTGCAGGTCACAGTTCCAAATGGAAGGAAAGGTAGGAAAGCAATTCTTAAGGGTCTAACTGGTTATGCCAAACCAGGGCAACTCTTGGCAGTAATGGGTCCTTCTGGCTGTGGCAAATCCACACTTCTTGATGCTTTAGCAGGGAGACTGGTTTCAAGCTCAAAGCAAACAGGGAAAATTCTAATTAATGGCCATAAACATGCACTGGCTTATGGAACATCTGCATATGTAACACATGATGATGCTGTTGTATCAACATTGACAGTAGGAGAAGCAGTGTACTATTCAGCTCATCTCCAATTTCCAGACTCAATGTCCAACAGAGAGAAGAAGGAGAGAGTAGACTTTACAATCAGACAAATGGGTTTACAAGAGAGCACAGACACAAGGATTAAAGGGAAGGGTTCTAAAGGCCTTAGTGAGGGGCAAAAGAGGAGACTAGCCATTTGTATTGAGATTCTTACAAGCCCCAAACTTCTCCTTCTTGATGAACCAACTAGTGGCCTAGACAGTGCAGCTTCCTACTATGTCATGAGCCGAATTGCAAGCCTAAAGATAAGAGATGGCATCGAAAGGACAATTGTTGCATCCATCCATCAGCCTAGTAGTGAAGTTTTTGAGCTATTTGATCATCTTTGTCTTCTGTCTTCAGGCGAAACAATATATTTTGGCACCACTTCTGCTGCAACCGAGTTCTTTGCTTCAAATGGCTTTCCTTGTCCATCTCTCCACAACCCTTCTGATCATTTCTTGAGGATCATAAACAAGGATTTCGTACTGGGTGATAAAGAACGCTTCCACGTAATAGTACCCAAAGAAGAAGCAGTGGATACCCTTGTGAAGTTTTATAACTCTTCTGAAATTAGTAACCAAGTTCAGAAAGAAGTAGCAGCAATAGGTGAAAGTGAATATGGTTTCATGGGGAGCAGCAAAACACAAACTGCATTTCTTACTCAGTGTCGCGTTCTTCTGAGAAGATCTTCAGTGCACTTGTTTCGTGATGTAACCAATTATTGGTTGCGTCTAGCTATGTTTACTGTAGCAGGTATTAGTATGGGAACTATATTCTATGACGTTGGTTCAAGTAATTCATCTATACAGGCTAGAGGGGCACTGGTCTCTTTTGTTGCTACAGTCCTAACTTACATAAACCTTCTTGGTGGATTCCCTCCATTTGTGGAACAAATGAAGGTATTTCAACGTGAGAGATTGAATGGGCACTATGGTGTTGCTGCTTTTGTCATTAGCCACACGCTATCACCGATTCCATATATGGTACTGATGTCAGTGATTCCTGGAGTGATCACTTATTACCTTTCTGGGCTTCATGCAGGACTTGAACGTTGCATCTACTTTTCTAGTGTATTACTTGCATGTATACTGTGGGTTGAGAGCCTGATGATGGTTGTTTCAAGTATCTTCCCAAATCCCAACACTGGCATCACAGTCTCCGGTGGAATTATGGGAGTGATGATTTTAACTGGTGGATTCTTTCGCCTTCCAAATGATCTTCCAAAACCATTTTGGAAATACCCTATGTACTATGTTTCCTTCCACAAATATGCCTTCCAAGGATTGTTCAAGAATGAATTCATTGGTCTGAAGTTGACTAGTGATCGAGATGGAGCTACCTACATAAGTGATAAGGAAATACTAACAAAGACATGGCAAGTGGAAACGAGTCACTCCAAATGGGTTGATCTTGCTATCTTAATGGGAATAATTGTTTCATATAGACTTATGTTCTTGGCAATCACTAAGAGTAAGGAGAGAAGATAA 1977 0.4133 MQGKPDPSATYPLSYTQSNMILMETPNCSPAPLIMQSNHEFVATVEEERNTSTKRKEERIFLTWEDLQVTVPNGRKGRKAILKGLTGYAKPGQLLAVMGPSGCGKSTLLDALAGRLVSSSKQTGKILINGHKHALAYGTSAYVTHDDAVVSTLTVGEAVYYSAHLQFPDSMSNREKKERVDFTIRQMGLQESTDTRIKGKGSKGLSEGQKRRLAICIEILTSPKLLLLDEPTSGLDSAASYYVMSRIASLKIRDGIERTIVASIHQPSSEVFELFDHLCLLSSGETIYFGTTSAATEFFASNGFPCPSLHNPSDHFLRIINKDFVLGDKERFHVIVPKEEAVDTLVKFYNSSEISNQVQKEVAAIGESEYGFMGSSKTQTAFLTQCRVLLRRSSVHLFRDVTNYWLRLAMFTVAGISMGTIFYDVGSSNSSIQARGALVSFVATVLTYINLLGGFPPFVEQMKVFQRERLNGHYGVAAFVISHTLSPIPYMVLMSVIPGVITYYLSGLHAGLERCIYFSSVLLACILWVESLMMVVSSIFPNPNTGITVSGGIMGVMILTGGFFRLPNDLPKPFWKYPMYYVSFHKYAFQGLFKNEFIGLKLTSDRDGATYISDKEILTKTWQVETSHSKWVDLAILMGIIVSYRLMFLAITKSKERR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2161 658 Pfam ABC-2 type transporter 384 597 IPR013525 GO:0016020|GO:0140359
Pvu2g2161 658 Pfam ABC-2 type transporter 265 321 IPR043926 GO:0140359
Pvu2g2161 658 SMART AAA_5 91 285 IPR003593 -
Pvu2g2161 658 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 35 657 - -
Pvu2g2161 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 35 657 - -
Pvu2g2161 658 Gene3D - 47 303 IPR027417 -
Pvu2g2161 658 Pfam ABC transporter 82 233 IPR003439 GO:0005524
Pvu2g2161 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 299 IPR027417 -
Pvu2g2161 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 308 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2161 Pvu-Chr2 37022239 37026179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2161 92 291 Calmodulin-binding Proteins AT2G36910 30.000 1.07e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2161 K05681 - gmx:100784793 1093.57