Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2151 ATGGCGGAGCCTGCTTCTTACGGTTTGGGACCTCGATTAGATCTTCAGCAATTACAACTTGAAGCCCAGAATAGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTTGCAATTATCGGATGTTTCAAATCACACCAGAACCACCTAACAGGCCACCAAGTGGCTCCCTTTTTCTATTTGATCGGAAGGTTTTAAGGTACTTCAGAAAAGATGGACATATTTGGAGAAAGAAAAAGGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTGTTGCACTGCTACTATGCCCATGGAGAAGAAAATGAAAGTTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTACTTGGATGTTAAGGTTAACAAAACCAATGTTGGTGGAAAAACATATTCTGGTGAGGCTACATCAGATTCCCAGAATGGAAGTTCTTTGTCATCTGGCTTTCCCAGAAATTATGGTAGTGTGCCTTCAGGAAGTACAGATTCCATGAGCCCAACCAGCACTTTGACGTCTTTATGTGAAGATGCTGATTCAGAGGATATTCATCAAGCAAGTTCAGGATTACAATCCTATCATGAATCAAAAAGTTTGGGGCCGATGGATAAGATTGATGCTTGTTCAAGTAGTTCATATCTTACACATCCATTTTCAGGTGATCCTGCACAGTTTCCAGTTCCTGGAGCTGAATATATCCCATTTGTTCAGGGTCATAAGTCTAGAGCTAGTGATACTGCTTACACCGAGGGTCATAGAGCACATGACATTGCATCATGGAACAATGCCATGGAGCAGTCTTCAGGAAAGCATACTGCTACTTCTCTTGTATCATCTACATCTATTCCAACAAGTGCATCGGGAAACATCCTTGAAGAAAACAATACTGTTCCAGGCAACCTTTTAGGGCGTAAAAATGCCCTCACTGAAGAGGAAAGGGCCTCACAGCCTATCCACTCAAATTGGCAGATTCCTTTTGAAGACGATACAATAGAATTACCTAAGTGGAGCCTTACCCAATCATTGGGCTTGGAATTTGGATCTGATTATGGCACTAGTTTACTGGGGGATGTAACTGATACTGTAGGCCCAGAAATTGTTGCTGAGATGTTCACTTTTAATGGTGAGTTAAAAGAGAAGTCTGTGCACCAAAACATCTCAAAGCAGTATACAAATACACAATCTCAACCTGCAACGAAATCCAATTCTGAGTATGAAGTGCCTGGTGAAGCCAGTATTAATTATGCCTTGACCATGAAGCGTGGATTATTGGATGGAGAGGAGAGCTTAAAGAAGGTTGATAGTTTCTCTAGGTGGATTACTAAAGAATTTGCAGGTGTGGATGATCTGCATATGCAGTCCTCCCCTGGCATTTCATGGAGCACAGATGATTGTGGAGATGTGATAGATGATACATCATTAAACCTGTCCCTTTCTCAAGATCAGCTGTTTAGCATAAATGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTGAAGAGTCAACCTATGGTGACAGCATGTAATTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTTTTAGCAAACGGAATTCTATGCTGTCAAGCTCCACCTCATAAGATTGGACGGGTTCCCTTCTATGTAACACGTGCCAATAGGTTTGCTTGTAGTGAAGTTCGGGAATTTGAGTACAGAGAAGGTGTCGACAGAAATGTCGATTTTGCAGATTTTTTTAACAGTGCAACTGAAATGGTCCTTCATTTGCGACTGGTGGGGTTACTTTCTTTAAATTCAGCGCACACTTCAAATCAAGTGTTTGAGGATGATATGGAGAAAAGAAACTTAATTTTCAAGCTTATTTCATTGAAAGAGGAAGAAGAATATTCATGTAGAGAAGAGACAACTGTGGAGATGGATACAACAAAACACAAGTTGAAGGAGCATATGTTTCACAAGCAGGTTAAAGAGACCTTGTACTCATGGCTTCTTCGCAAAGTAACTGAAACTGGTAAAGGGCCTCGTGTATTAAGTGAAGAAGGGCAGGGCGTGTTACATTTAGTTGCTGCTCTTGGTTACGATTGGGCCATAAAACCAATCATAACTGCTGGAGTCAATATCAACTTCCGTGATGCGAGTGGATGGACAGCTTTACATTGGGCTGCATACTGTGGCCGGGAGCGAACAGTTGCAGTCCTTGTGTCCATGGGTGCAGACACTAAAGCAGTGACAGATCCATGTTCAGAAGCTCGTGAAGGTAGATCACCTGCGGATCTTGCTTCTAGCAATGGGCACAAAGGACTTTCCGGTTTTCTTGCTGAGTCATTATTAACTAGCCAGCTTGAATTACTCACGATGGAGGAAAATAAAGATGGTAGGAAAGAAACTTCAGGAATGAAAGCAGTACAAACAGTTTCAGAGCGAACTGCTTTACCTGTGCTTTATGGTGAAGTACCAGATGCTATCTGCCTTAAGGATTCCCTCAATGCTGTCCGGAATGCTACACAAGCTGCTGATCGAATACATCAAGTATACAGAATGCAGTCATTTCAGAGGAAACAGTTAGCTCAGCATGATGATGATGAATTTGGATTGTCAGATCAACAAGCTCTTTCCCTTTTAGCTTCTAGGACGAACAAATCTGGACAAGGAGAGGGTTTAGCCAGTGCTGCTGCAATACAAATACAGAAAAAGTTTCGGGGTTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTAAGAGGTCACCAGGTCAGAAAGCAGTATAAACCAATCATATGGTCCGTGGGAATCCTGGAAAAGGTCATATTACGCTGGAGGCGCAAGGGTAGTGGTTTACGTGGATTTCGATCAGATACCGTGAACAAGGTCGTCCCTGACCAACCAAGCGAATCTCTGAAAGAGGATGATTATGATTTTCTCAAGGAAGGAAGGAAACAGAGTGAAGCAAGGTTCAAAAAGGCCCTTTCACGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACCAAGGGAGATAATATGAATTCGATGAATTCTGAAGAGGCAGTTGACGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTACCTATAGCTTTCGATTGA 3261 0.4216 MAEPASYGLGPRLDLQQLQLEAQNRWLRPAEICEILCNYRMFQITPEPPNRPPSGSLFLFDRKVLRYFRKDGHIWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENESFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNVGGKTYSGEATSDSQNGSSLSSGFPRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLQSYHESKSLGPMDKIDACSSSSYLTHPFSGDPAQFPVPGAEYIPFVQGHKSRASDTAYTEGHRAHDIASWNNAMEQSSGKHTATSLVSSTSIPTSASGNILEENNTVPGNLLGRKNALTEEERASQPIHSNWQIPFEDDTIELPKWSLTQSLGLEFGSDYGTSLLGDVTDTVGPEIVAEMFTFNGELKEKSVHQNISKQYTNTQSQPATKSNSEYEVPGEASINYALTMKRGLLDGEESLKKVDSFSRWITKEFAGVDDLHMQSSPGISWSTDDCGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPMVTACNWSCMFGEVEVPAEVLANGILCCQAPPHKIGRVPFYVTRANRFACSEVREFEYREGVDRNVDFADFFNSATEMVLHLRLVGLLSLNSAHTSNQVFEDDMEKRNLIFKLISLKEEEEYSCREETTVEMDTTKHKLKEHMFHKQVKETLYSWLLRKVTETGKGPRVLSEEGQGVLHLVAALGYDWAIKPIITAGVNINFRDASGWTALHWAAYCGRERTVAVLVSMGADTKAVTDPCSEAREGRSPADLASSNGHKGLSGFLAESLLTSQLELLTMEENKDGRKETSGMKAVQTVSERTALPVLYGEVPDAICLKDSLNAVRNATQAADRIHQVYRMQSFQRKQLAQHDDDEFGLSDQQALSLLASRTNKSGQGEGLASAAAIQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKVILRWRRKGSGLRGFRSDTVNKVVPDQPSESLKEDDYDFLKEGRKQSEARFKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGDNMNSMNSEEAVDGVEDLIDIDMLLDDENFLPIAFD* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2151 1086 SMART iq_5 908 930 IPR000048 GO:0005515
Pvu2g2151 1086 SMART iq_5 931 953 IPR000048 GO:0005515
Pvu2g2151 1086 MobiDBLite consensus disorder prediction 147 187 - -
Pvu2g2151 1086 CDD IPT 500 588 - -
Pvu2g2151 1086 Gene3D - 660 806 IPR036770 -
Pvu2g2151 1086 Gene3D - 909 955 - -
Pvu2g2151 1086 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Pvu2g2151 1086 SUPERFAMILY Ankyrin repeat 689 795 IPR036770 -
Pvu2g2151 1086 ProSiteProfiles Ankyrin repeat profile. 734 766 IPR002110 GO:0005515
Pvu2g2151 1086 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
Pvu2g2151 1086 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 909 959 IPR027417 -
Pvu2g2151 1086 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Pvu2g2151 1086 SUPERFAMILY E set domains 501 587 IPR014756 -
Pvu2g2151 1086 SMART ANK_2a 701 730 IPR002110 GO:0005515
Pvu2g2151 1086 SMART ANK_2a 734 763 IPR002110 GO:0005515
Pvu2g2151 1086 ProSiteProfiles Ankyrin repeat profile. 701 733 IPR002110 GO:0005515
Pvu2g2151 1086 ProSiteProfiles Ankyrin repeat region circular profile. 734 760 - -
Pvu2g2151 1086 Gene3D Immunoglobulins 494 590 IPR013783 -
Pvu2g2151 1086 Pfam IPT/TIG domain 501 586 IPR002909 -
Pvu2g2151 1086 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1086 - -
Pvu2g2151 1086 SMART CG_1_2 18 136 IPR005559 GO:0003677
Pvu2g2151 1086 Pfam IQ calmodulin-binding motif 911 929 IPR000048 GO:0005515
Pvu2g2151 1086 Pfam IQ calmodulin-binding motif 934 953 IPR000048 GO:0005515
Pvu2g2151 1086 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1086 - -
Pvu2g2151 1086 ProSiteProfiles IQ motif profile. 932 956 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2151 Pvu-Chr2 36924678 36935363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2151 1 1067 CAMTA Transcription Factor Family AT5G64220 52.130 0.0 1052
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pvu2g2151 CG-1 2.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2151 K21596 - gmx:100795682 1831.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2151 2 36924678 36935363 Pvu6g2136 6 30900851 30911858 PCT