Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2146 ATGGATTCTGCGTTCTCCGTTACCACCACGGCGCACATGGCGCTTTTCAGAGCGCTTCACCGTCATTTTGCTGGAGCTCCTCAACGCGCCTTTGTCCGCCGCAACCTCAAATGCCTCGTTGCTTCCTACAACAACCGCTGCAGCATTCCATGTTCTTTCACTTCCGCGCCGTCGCCGTCCTCGTTCCGCTGCTTCCGCGGATTGTTCCCGCGAACGCCGTGCCGACTGCGCTGCATTTCGAGCTCCGCCGCTTCCTGTGCTTCTTCTACCGGCGGTGGAAATGGAGGCGGTGGAACCGGTGAGAGCGGAGGTTCTGGCGGTTCTGGCGGTGAGTCTGGTGATGCTAGTCTCCAATTGGTTGGGGACGCGTCACAGGAGCTTTCGGCACTTTCGCCTGATGTTATCATTCTCGATGTTTCAGGAATGGTGTGCGGGGGATGCGCGGCGACTGTGAAAAGGATACTGGAAAATCGACCACAGGTGTCATCAGCTAGTGTAAATTTAACAACAGAGACAGCAATCGTTTGGCCTATATCTGAAGCAAAGAATGCACCAAATTGGCAAAAGCAATTAGGGGAGGCACTTGCAGATCATTTAACTAGCTGTGGTTACAATTCTAGCCTCCGAGATTCTACAAGAGACAATTTCCTCCAAATTTTTGAAAGGAAGATGGAGGAAAGACACAGACAATTAAGAGAAAGTGGTCGTGAACTAGCTGTTTCTTGGGCTCTATGTGCTGTCTGTCTTGTTGGCCACTTCTCTCATTTCTTTGCAGCAAAGGCACCGTGGATCCATGTCTTTCATTCCATTGGGTTTCATCTATCCTTATCTTTGTTTACATTGCTTGGTCCTGGCCGCCAACTTATCCTTGATGGCTTAAAAAGCCTTCTTAAAAGGACACCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTGTCATCATTTACTGTCAGCTCATTTGCTGCCTTAGTTCCAAAATTGGGATGGAAGGCTTTCTTTGAGGAGCCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTCGAACAGAGAGCAAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGTTTGTTGCCACCAAAAGCTCGCCTTCTAGTCAACAATGGAGAAACAGAGGCTGGCTCGGTTGTTGAAGTTCCTTCTGACAGTCTTTCTATTGGAGACCAAATTATTGTGTTGCCTGGAGACCGAATTCCGGCTGATGGAGTTGTGAGAGCTGGTAGAAGCACTGTAGATGAATCAAGTTTCACGGGTGAACCACTGCCTGTAACAAAAGTACCTGGGAGTGAGGTAGCAGCTGGTAGTATAAATCTTAATGGAACTCTTACAATGCAAGTGCAAAGACCAGGTGGTGAAACTTCTATGGCAAACATTGTTCGTCTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTGCAACGGTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTGATGGCAGCTTCTGCTGCCACATTCACATTCTGGAGTCTGTATGGCACACACATTTTGCCTCCTGCTTTATATCAAGGAAGTTCAGTTTCACTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCAGTGCTGGTTGGAACATCGTTGGGGGCTAAAAGAGGTTTACTTGTCCGTGGTGGAAACATTCTAGAGAAGTTTGCAATGGTAAACACTGTTGTGTTTGACAAAACAGGGACCCTCACGGTTGGTAGACCTGTTGTGACAAACATTGTCACTCCGTCATGCAAAAAGGCAATTTCAAGCCAGACTGAAGAAAATGTTTTGTCTGATGTTGAAGTTCTAAGGCTAGCAGCTGCAGTAGAATCGAATTCCATACATCCAGTTGGGAAAGCGATCGTGGATGCTGCTCTGGCTGTTAACTGTCATAATGCTAAGGTAATAGATGGAACATTCCTGGAAGAACCTGGGTCTGGTGCTGTGGCAACAATTGATAACAAAAAGGTTTCTGTTGGTACATTGGAATGGATCACCAGGCATGGAGTTATTAACAGTTTACATCAAGAAGTGGAGAAATATAATAATCAATCCTTTGTCTATGTTGGAATTGACGATACTTTAGCTGGACTAATTTATTTTGAAGATGAGATAAGGGAAGATGCAAGAGACGTTGTTGACAGATTGTCAAAGCAAAATCTAGGTGTATACATGCTATCAGGAGACAAGAGGAATGCCGCTGAGCATGTTGCGTCTCTTGTTGGAATTCCCAAAGATAAGGTGCTATCTGAAGTGAAACCAGATGAGAAAAAGAAGTTCATAAATGACCTACAAAAAGATAAGAACATTGTAGCTATGGTTGGTGATGGAATTAACGATGCAGCGGCCCTGGCTTCTTCCCATGTTGGTATTGCATTAGGTGGAGGTGTCGGGGCTGCTAGTGAGGTGTCTTCTATTGTATTAATGCGCAACCAGCTGTCACAGCTACTTGATGCCTTGGAGCTGAGCAGGCTGACCATGAATACTGTAAAACAGAATCTTTGGTGGGCTTTCGTCTACAACATTGTAGGAATTCCAATTGCAGCTGGAGTGTTATTTCCCATAAATGGAACTATTCTGACTCCATCAATTGCGGGGGCTCTCATGGGGCTGAGTTCCATTGGTGTAATGACCAACTCATTACTTTTGAGATTCAAATTTTCCTCAAAGCAGAAACAAATACATAATAGTACATCACCAAATACCAAAATCCATGTGCGTTCTGATCTGGCACAACATAACCAGAAAACAAGTCGACCAAGACCTTATTAG 2835 0.4547 MDSAFSVTTTAHMALFRALHRHFAGAPQRAFVRRNLKCLVASYNNRCSIPCSFTSAPSPSSFRCFRGLFPRTPCRLRCISSSAASCASSTGGGNGGGGTGESGGSGGSGGESGDASLQLVGDASQELSALSPDVIILDVSGMVCGGCAATVKRILENRPQVSSASVNLTTETAIVWPISEAKNAPNWQKQLGEALADHLTSCGYNSSLRDSTRDNFLQIFERKMEERHRQLRESGRELAVSWALCAVCLVGHFSHFFAAKAPWIHVFHSIGFHLSLSLFTLLGPGRQLILDGLKSLLKRTPNMNTLVGLGALSSFTVSSFAALVPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSLLPPKARLLVNNGETEAGSVVEVPSDSLSIGDQIIVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKVPGSEVAAGSINLNGTLTMQVQRPGGETSMANIVRLVEEAQSREAPVQRLADKVAGHFTYGVMAASAATFTFWSLYGTHILPPALYQGSSVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLVRGGNILEKFAMVNTVVFDKTGTLTVGRPVVTNIVTPSCKKAISSQTEENVLSDVEVLRLAAAVESNSIHPVGKAIVDAALAVNCHNAKVIDGTFLEEPGSGAVATIDNKKVSVGTLEWITRHGVINSLHQEVEKYNNQSFVYVGIDDTLAGLIYFEDEIREDARDVVDRLSKQNLGVYMLSGDKRNAAEHVASLVGIPKDKVLSEVKPDEKKKFINDLQKDKNIVAMVGDGINDAAALASSHVGIALGGGVGAASEVSSIVLMRNQLSQLLDALELSRLTMNTVKQNLWWAFVYNIVGIPIAAGVLFPINGTILTPSIAGALMGLSSIGVMTNSLLLRFKFSSKQKQIHNSTSPNTKIHVRSDLAQHNQKTSRPRPY* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2146 944 CDD HMA 137 204 IPR006121 GO:0046872
Pvu2g2146 944 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 666 876 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g2146 944 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 340 622 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu2g2146 944 CDD P-type_ATPase_HM 238 903 - -
Pvu2g2146 944 PANTHER ATP7, ISOFORM B 91 906 - -
Pvu2g2146 944 SFLD p-type atpase 565 845 IPR044492 -
Pvu2g2146 944 Gene3D - 353 476 - -
Pvu2g2146 944 SUPERFAMILY HAD-like 581 902 IPR036412 -
Pvu2g2146 944 Gene3D - 574 845 IPR023214 -
Pvu2g2146 944 Pfam Heavy-metal-associated domain 137 175 IPR006121 GO:0046872
Pvu2g2146 944 Gene3D - 134 211 - -
Pvu2g2146 944 PRINTS Copper-transporting ATPase signature 288 307 - -
Pvu2g2146 944 PRINTS Copper-transporting ATPase signature 336 355 - -
Pvu2g2146 944 PRINTS Copper-transporting ATPase signature 566 581 - -
Pvu2g2146 944 PRINTS Copper-transporting ATPase signature 772 789 - -
Pvu2g2146 944 SUPERFAMILY Calcium ATPase, transmembrane domain M 333 874 IPR023298 -
Pvu2g2146 944 Pfam E1-E2 ATPase 367 563 - -
Pvu2g2146 944 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 303 904 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu2g2146 944 MobiDBLite consensus disorder prediction 914 929 - -
Pvu2g2146 944 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Pvu2g2146 944 PRINTS P-type cation-transporting ATPase superfamily signature 583 597 - -
Pvu2g2146 944 PRINTS P-type cation-transporting ATPase superfamily signature 718 729 - -
Pvu2g2146 944 PRINTS P-type cation-transporting ATPase superfamily signature 740 750 - -
Pvu2g2146 944 PRINTS P-type cation-transporting ATPase superfamily signature 795 814 - -
Pvu2g2146 944 PRINTS P-type cation-transporting ATPase superfamily signature 818 830 - -
Pvu2g2146 944 MobiDBLite consensus disorder prediction 914 944 - -
Pvu2g2146 944 ProSitePatterns Heavy-metal-associated domain. 139 168 IPR017969 GO:0046872
Pvu2g2146 944 Pfam haloacid dehalogenase-like hydrolase 579 807 - -
Pvu2g2146 944 ProSiteProfiles Heavy-metal-associated domain profile. 134 208 IPR006121 GO:0046872
Pvu2g2146 944 SUPERFAMILY HMA, heavy metal-associated domain 135 184 IPR036163 GO:0046872
Pvu2g2146 944 SFLD C1.7: P-type atpase like 565 845 - -
Pvu2g2146 944 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 285 905 - -
Pvu2g2146 944 MobiDBLite consensus disorder prediction 85 115 - -
Pvu2g2146 944 Gene3D - 594 726 IPR023299 GO:0000166
Pvu2g2146 944 ProSitePatterns E1-E2 ATPases phosphorylation site. 585 591 IPR018303 -
Pvu2g2146 944 SUPERFAMILY Calcium ATPase, transduction domain A 383 472 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2146 Pvu-Chr2 36879329 36904232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2146 294 905 Primary Pumps ATPases AT1G63440 39.746 7.73e-123 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2146 K17686 - gmx:100796210 1612.05