Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2131 ATGGATGCTTTATCTTTAAGTTCAAGTTCAAGCCTAAGCATGTGCAAGCCCTTTCAATCTCATGGCCTTCCACTCTCTAAACAGCAAAGAGTTTCTAATGTGAAGTTTGGTACTGTTTCATGCAGAGCCACAACCCAAGAAAACTTGTACAAAGTGTTGTCTGTGAACCCGGGAAGAGCAACAATGGATGAGATTAAGAGGGCTTATAGATCCATGGCTCTTCGGTACCACCCTGATGTGTGCCACGATCCCTCCATGAAAGAGGAGTCTACGAGGCTGTTTGTGCAGCTAAATGCAGCTTACAAGACCTTGTCCAATCCAAGGCTTCGAGAACAGTACGACAGTGAATTGGGTCTGAGAAGCAAAGTCATGAGTGTTGGTAGTGATCATGAGAGATGGGGAAGTGTGAGTGTTTGTAGTGACCATGAGAGATGGGGAAGTATGTTTCAGGAGGAAGTGATTGAGGTGAAGACAAGGTCTCGTAGACGAATGGGACAAAAGGGAGGATCATCAGCTACCAGAATGAGAACACAAAATATGAAAGACAGACATTGA 555 0.4468 MDALSLSSSSSLSMCKPFQSHGLPLSKQQRVSNVKFGTVSCRATTQENLYKVLSVNPGRATMDEIKRAYRSMALRYHPDVCHDPSMKEESTRLFVQLNAAYKTLSNPRLREQYDSELGLRSKVMSVGSDHERWGSVSVCSDHERWGSMFQEEVIEVKTRSRRRMGQKGGSSATRMRTQNMKDRH* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2131 184 Gene3D DnaJ domain 35 132 IPR036869 -
Pvu2g2131 184 SMART dnaj_3 47 109 IPR001623 -
Pvu2g2131 184 MobiDBLite consensus disorder prediction 158 184 - -
Pvu2g2131 184 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 6 183 - -
Pvu2g2131 184 ProSiteProfiles dnaJ domain profile. 48 117 IPR001623 -
Pvu2g2131 184 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 6 183 - -
Pvu2g2131 184 SUPERFAMILY Chaperone J-domain 43 113 IPR036869 -
Pvu2g2131 184 CDD DnaJ 48 106 IPR001623 -
Pvu2g2131 184 Pfam DnaJ domain 48 114 IPR001623 -
Pvu2g2131 184 PRINTS DnaJ domain signature 51 69 IPR001623 -
Pvu2g2131 184 PRINTS DnaJ domain signature 69 84 IPR001623 -
Pvu2g2131 184 PRINTS DnaJ domain signature 89 109 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2131 Pvu-Chr2 36727159 36727894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2131 50 115 C2H2 Transcription Factor Family AT1G74250 38.235 2.93e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2131 - - gmx:100811478 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2131 2 36727159 36727894 Pvu6g2149 6 31000117 31000874 PCT