Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2128 ATGAAGCAAGTGATTTCATCTTTCAGGTGTTTGTTTCTTCTTTGTGCAGTTTTGGTGCTTGACTTCATGGTCAAGGTTTCTGGCAACCAAGAAGGTGATGCCCTGGATGCATTTAAGGGCAATATGAATGATCCTAACAATGTTCTTCAGAGTTGGGATTCTACCCTTGTAAATCCTTGCACATGGTTTCATGTTACTTGCGATAATGACAATAGGGTGATCCGTGTTGATCTTGGAAATGCAAACCTTTCGGGTGAGCTCGTTGCACAACTTGGTCAACTCCCAAAGTTGCAATACTTGGAACTTTATAGTAATAATATAACTGGGAAAATCCCAATTGAGCTAGGGAGTTTGACAAACTTGGTGAGCTTGGATCTTTACTCGAACAAAATTACTGGTACCATTCCAGACGAATTGGCCAACCTTAAAAATCTACGTTTCCTGCGTCTCAACAATAATACCTTGTCAGGAAAAATTCCTATGCGTCTGACCAATGTCGATAAACTGCAAGTGCTTGATTTATCGAAAAACAACTTAACAGGAGATGTCCCAACCACTGGTTCTTTTTCCTATTTTACTCCCATCAGTTTTAGGAATAATCCCCTATTGAATTATAGTAGCCTTCTATATCCACCAGCTTCAGCACCGCCACAAAGTCCTCCAGGTAACAATAACCGTGCTGTTGGAATCATTGCTGGAGGAGTTGCTGTGGGTGCTGCATTGTTGTTTGCAGCTCCTGTAATTGCACTTGTTTATTGTAAGAGAAGGAAACCACAGGATTTTTTCTTTGATGTTGCAGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCACTGCGGGAACTACAAGTTGCAACAGATACCTTTAACAACAAAAACGTTCTTGGTAGAGGTGGATTTGGCAAGGTTTATAAAGGACGCTTAACAAATGGATATCTTGTAGCAGTAAAAAGACTCAAAGAGGAACGAACCCAGGGTGGGGAGATGCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGCCTGCATGGTTTTTGTATGACACCTACTGAACGTTTGCTTGTGTATCCTTTCATGGCTAATGGAAGTGTTGCTTCATGTTTACGAGATCGTCCGGAAGCACAGCCACCACTTGAATGGTCAAAACGGAAGAGTATTGCTCTAGGAGCTGCTAAGGGGCTTGCTTATTTGCATGATCATTGTGATCCAAAGATTATTCATCGTGATGTGAAAGCTGCAAATATATTGTTGGATGAGGACTTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAAAGCTAATGGATTACAAAGATACTCATGTTACTACTGCGGTACGAGGTACTATTGGCCATATAGCACCTGAGTACCTCTCAACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTTGATTTAGCACGACTTGCCAATGATGATGATGTTATGTTGCTTGATTGGGTGAAAGCACTTTTGAAAGACAAGAGGTTGGAGACACTGGTGGATGGAGATTTGGAGGGAAGTTATGAGGAAGAGGAAGCAGAAGAGTTAATCCAAGTGGCCTTGTTATGCACACAAAGCTCCCCTTTGGAAAGACCAAAGATGTCTGAGGTGGTGAGAATGCTAGAGGGTGAAGGTTTGGCAGAAAAATGGGAAAAATGGTGGCAAAAAGAGGATACAATCCAACAAAAGTTTGACCCCTCCAGTCTCCACCATGCTTACTGGCCATTATCAGACTCAACTTCAAATATTCTCCCAGATGAACTGTCAGGGCCTAGATGA 1857 0.419 MKQVISSFRCLFLLCAVLVLDFMVKVSGNQEGDALDAFKGNMNDPNNVLQSWDSTLVNPCTWFHVTCDNDNRVIRVDLGNANLSGELVAQLGQLPKLQYLELYSNNITGKIPIELGSLTNLVSLDLYSNKITGTIPDELANLKNLRFLRLNNNTLSGKIPMRLTNVDKLQVLDLSKNNLTGDVPTTGSFSYFTPISFRNNPLLNYSSLLYPPASAPPQSPPGNNNRAVGIIAGGVAVGAALLFAAPVIALVYCKRRKPQDFFFDVAAEEDPEVHLGQLKRFSLRELQVATDTFNNKNVLGRGGFGKVYKGRLTNGYLVAVKRLKEERTQGGEMQFQTEVEMISMAVHRNLLRLHGFCMTPTERLLVYPFMANGSVASCLRDRPEAQPPLEWSKRKSIALGAAKGLAYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKALLKDKRLETLVDGDLEGSYEEEEAEELIQVALLCTQSSPLERPKMSEVVRMLEGEGLAEKWEKWWQKEDTIQQKFDPSSLHHAYWPLSDSTSNILPDELSGPR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2128 618 Pfam Leucine rich repeat 95 155 IPR001611 GO:0005515
Pvu2g2128 618 Gene3D Transferase(Phosphotransferase) domain 1 370 587 - -
Pvu2g2128 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Pvu2g2128 618 ProSiteProfiles Protein kinase domain profile. 293 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2128 618 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pvu2g2128 618 Pfam Protein kinase domain 294 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2128 618 PANTHER BNAA08G11770D PROTEIN 11 618 IPR031048 GO:0004675|GO:0005102|GO:0006468
Pvu2g2128 618 Gene3D Phosphorylase Kinase; domain 1 262 369 - -
Pvu2g2128 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 618 - -
Pvu2g2128 618 SMART serkin_6 293 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2128 618 SUPERFAMILY L domain-like 30 205 - -
Pvu2g2128 618 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Pvu2g2128 618 Gene3D Ribonuclease Inhibitor 27 209 IPR032675 -
Pvu2g2128 618 SUPERFAMILY Protein kinase-like (PK-like) 273 568 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2128 Pvu-Chr2 36699345 36704980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2128 10 618 Receptor kinase-like Gene Family AT4G33430 71.125 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pvu2g2128 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2128 K13416 - gmx:100804180 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2128 2 36699345 36704980 Pvu6g2153 6 31031104 31036671 PCT