Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2127 ATGGGCTACAAGAAGCGACTGATTCCATATTTCATGTGTTTGTATGCTATTTTTTGGACACTTTTGGTGCTTCACTTGCTGCTCAAGGTTTCTGGCAATGCAGAAGGTGATGCCCTGACTACATTCAAGAATAATATGATAGATCCTACTGATGCTCTTCGTAGTTGGGATCCTGGCGTTATAACTCCTTGTACATGGTTGCATGTTACTTGCAACGAAGAAAGTAGCGTAATCCGTTTGGATCTTGGAAATGCAAACCTTTCGGGTCAGCTTGTTCCAGAGCTTGGTCAGCTCCCAAATTTGGAATATTTGGAACTTTATAACAATAATATAACTGGGGAGATCCCAAATGTGCTTGGAAATTTGACGAACTTGCAGACTTTGGATCTTTACTCGAACAACATTACTGGTCAAATTCCAGACGAGTTAGCCAAACTTAAAAAACTGCGAGACCTGCGTCTCAGCAAAAACAGCTTGTCAGGAAAGATTCCTGTGGGTTTGACCACAATTGATACACTGCAAGTTCTTGACTTATCGTACAACAACTTAACAGGGAATGTCCCAATCGATGGTTCATTTTCAAGTTTTACTCCCATCAGTTTTGACCATAATCCTTTCTTGAAGCAAACCACTCCAACATCACCACGCGTTATACAGAAACAAAATCCTTCAGGTAATAGTTTCATATCTATTGCCGCCATTGCTGGAGGAGTTGCCGTGGGTGCTGCACTGTTGTTTGCAGCTCCAGTAATTGCATTTGTTTACTGGAAAAGAAGGAAGCCACCAGATTATTTCTTTGATGTTGCAGCTGACGAGGATCCTGAAGTTAACTTTGGTCAACTTAAAAGGTTTTCGCTGCATGAACTGCTAGTTGCAACAGATGCCTTTAATAACAAAAACATTATTGGCAGAGGTGGATTTGGCAAGGTTTATAAAGGACGCTTAACAAATGGTGATCTTGTAGCAGTAAAAAGACTTAACCAAGAACACATCCACTGTGAGGAGAAACAATTTCAAATAGAAGTGGAAATTATCAGCATGGCTGTGCATCGAAATTTGCTTCGGCTGATTGGTTTTTGTATGACAACTACTGAAAGATTGCTTGTGTTTCCTTTCATGGTTAATGGAAGTGTAGAGTCATGTTTACGAGAGCGAGCAGAATCACAAGCACCAGTTCAATGGCCAGTTCGGAAGCGTATTGCTCTAGGAGCAGCTAAGGGGCTTGCTTATTTGCATGATCATTGTAACCCAAAGATTATTCATCGTGATATCAAAGCTGCTAATGTATTATTGGATAAGGACTTTGAAGCAGTTGTAGGAGATTTTGGTTTAGCAAAGATTATGGATTACAAAAATACTCATGTTACTACTGCTGTACGTGGGACAGTTGGCCACATAGCACCAGAGTATCTCTCAACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAGATAATAACTGGACAGAGGGCTTTTAATTTAGCACGACATGCCATTAGTGATGAGGTCATGTTGCTAGAATGGGTGAAATCACTTCTGAAAGAGAGGAAGTTGAAGACACTGGTGGATGCAGATTTACATGGAGATTATGACGAGGAGGAACTAGAGGAGTTAATCCAAATAGCATTGCTATGCACACAAAGCTCCCCTTTGGATAGACCAAAGATGTCTGAGGTGGTGAGAATGCTAGAGGGTGAAGGTTTGAAAGAAAAGTGGGATAAATGGAGGAAGAAAGAAGATAGAATCCAAAAAGATTGCAACTCCTTCAATCTCTACATAAAAAATTATGACTCAACTTCAAATATTGCACCAGATGAATTGTCTGGTCCTAGATGA 1857 0.4039 MGYKKRLIPYFMCLYAIFWTLLVLHLLLKVSGNAEGDALTTFKNNMIDPTDALRSWDPGVITPCTWLHVTCNEESSVIRLDLGNANLSGQLVPELGQLPNLEYLELYNNNITGEIPNVLGNLTNLQTLDLYSNNITGQIPDELAKLKKLRDLRLSKNSLSGKIPVGLTTIDTLQVLDLSYNNLTGNVPIDGSFSSFTPISFDHNPFLKQTTPTSPRVIQKQNPSGNSFISIAAIAGGVAVGAALLFAAPVIAFVYWKRRKPPDYFFDVAADEDPEVNFGQLKRFSLHELLVATDAFNNKNIIGRGGFGKVYKGRLTNGDLVAVKRLNQEHIHCEEKQFQIEVEIISMAVHRNLLRLIGFCMTTTERLLVFPFMVNGSVESCLRERAESQAPVQWPVRKRIALGAAKGLAYLHDHCNPKIIHRDIKAANVLLDKDFEAVVGDFGLAKIMDYKNTHVTTAVRGTVGHIAPEYLSTGKSSEKTDVFGYGVMLLEIITGQRAFNLARHAISDEVMLLEWVKSLLKERKLKTLVDADLHGDYDEEELEELIQIALLCTQSSPLDRPKMSEVVRMLEGEGLKEKWDKWRKKEDRIQKDCNSFNLYIKNYDSTSNIAPDELSGPR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2127 618 ProSiteProfiles Leucine-rich repeat profile. 124 147 IPR001611 GO:0005515
Pvu2g2127 618 SUPERFAMILY L domain-like 35 206 - -
Pvu2g2127 618 Pfam Protein kinase domain 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2127 618 ProSiteProfiles Protein kinase domain profile. 296 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2127 618 Gene3D Phosphorylase Kinase; domain 1 265 372 - -
Pvu2g2127 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Pvu2g2127 618 SMART serkin_6 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2127 618 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Pvu2g2127 618 PANTHER LRR RECEPTOR KINASE SERK2 24 618 - -
Pvu2g2127 618 ProSiteProfiles Leucine-rich repeat profile. 100 123 IPR001611 GO:0005515
Pvu2g2127 618 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Pvu2g2127 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 24 618 - -
Pvu2g2127 618 Gene3D Transferase(Phosphotransferase) domain 1 373 590 - -
Pvu2g2127 618 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Pvu2g2127 618 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Pvu2g2127 618 SUPERFAMILY Protein kinase-like (PK-like) 276 571 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2127 Pvu-Chr2 36688123 36693789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2127 4 618 Receptor kinase-like Gene Family AT4G33430 61.769 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pvu2g2127 Pkinase 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2127 K13416 - gmx:100804180 860.136