Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2108 ATGGCTACTGCTACACCCAATGGTTTGGTGTCACTCAACCATGCAGTAGCAGTACATCCAAGTCCAGCAAATAAAATTGACGAGAAGCAAACCCAGAAAGTTGTTGATGATGATGACAACATTAACTATATGGAAAGAGCTCAGTGGCTTCGTCCAGCAGTTTTAGGAGCCAATGATGGGTTGGTTTCGGTTGCTTCATTGATGATGGGTGTAGGAGCCGTTCAAAAGGATGCAAAGGCTATGCTACTTTCTGGTTTTGCAGGATTGGTTTCAGGGGCTTGTGGTATGGCGATAGGAGAGTTCGTTGCTGTGTACACTCAGTATGAGGTTGAGGTTGGTCAAATGAAGAGAGATATGAAGATGAGTGTGGGAGGGGAAAAAGACTTGGAGATGGAAATGGAGAAAAGAACATTTCCTAATCCACTGAAAGCTACTTTGGCATCTGCAGTATCCTTTTCTATAGGTGCATTGATACCTCTACTTTCAGCGGCTTTCATAGAAAGTTTCAAGACAAGGATTATTGTGATTGTGGTAGTGGCTAGCTTGGCTTTGGTGGTGTTTGGAAGGGTGGTGGCTCAACTGGGAAAAACTCCTACAACAAAATCTTATGCAAGGTTCCTTCTTGGAGGATGGTTAGCCATGGCCCTCACTTTTGGGTTAACCAAATTACTGGGTGCTAGTGCTTTGTAA 690 0.4391 MATATPNGLVSLNHAVAVHPSPANKIDEKQTQKVVDDDDNINYMERAQWLRPAVLGANDGLVSVASLMMGVGAVQKDAKAMLLSGFAGLVSGACGMAIGEFVAVYTQYEVEVGQMKRDMKMSVGGEKDLEMEMEKRTFPNPLKATLASAVSFSIGALIPLLSAAFIESFKTRIIVIVVVASLALVVFGRVVAQLGKTPTTKSYARFLLGGWLAMALTFGLTKLLGASAL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2108 229 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 1 226 - -
Pvu2g2108 229 Pfam VIT family 130 221 IPR008217 GO:0005384|GO:0030026
Pvu2g2108 229 Pfam VIT family 50 117 IPR008217 GO:0005384|GO:0030026
Pvu2g2108 229 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 226 IPR008217 GO:0005384|GO:0030026
Pvu2g2108 229 CDD Nodulin-21 48 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2108 Pvu-Chr2 36507753 36508880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2108 36 229 Nodulin-like Gene Family AT3G43660 57.732 3.02e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2108 K22736 - gmx:100803012 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2108 2 36507753 36508880 Pvu2g2108 2 36507753 36508880 ECH