Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2107 ATGGCTGAGTTTTGGCTTGAGGCTCATGGTTTATTTGTTGCACTTAGGTTCTTCTTTTTGTTTGATAACCAACTTGTGTGTTCTGTCTGTCAGATAATTTCTTGTGCTGCAAGTAGCAAGATGGCTGGAAGTGTTGATGTTTTAGCTCCTGATTCCAGCATTAATGGAACAATGAAACCTTTGCCTGAGGTTTTCAATTCCACGGCTTTTATAACAGATCATGTACATGTACCACTCATGGCCGAAGAGGATGACATTGCAGGCAAGGGAGAGGCTCAGAATGGTACAGAAAATGGGGAGAGAAATATTGTCCTGGGAAGAAATATCCATACCATGTGCCTTGAAGTCTCAGAGCCTGATATAGATGATGAGGTTACTGGTGAAAGGGAAGCTTATATGGCAAGTGTGTTGGCTAAATACAAAAAATCTCTGACTGAAAGGACAAAATATCATTTAGGTTACCCCTATAATTTGGATTTTGACTATGAGGCACTCTCTCAACTTCAGCACTTTTCTATCAACAACTTGGGAGATCCATTTATTGAAAGCAACTATGGTGTCCACTCGAGGCAGTTTGAGGTTGGTGTTTTGGACTGGTTTGCGAGGTTGTGGGAATTGGAGAAAGACGAGTACTGGGGCTATATAACAAACTGTGGCACAGAAGGCAATCTCCATGGAATCCTTGTTGGGAGAGAGGTTTTCCCAGATGGGATTTTATATGCCTCAGAGGAGTCACATTATTCTGTATTCAAAGCTGCTCGTATGTACAGAATGGAATGTGTGAAGATTGACACACTTTGTTCTGGTGAAATTGACTGTGATGATTTCAAGGCCAAGCTTCTTTGTCACAAGGACAAGCCAGCGATTGTGAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGACCTTGACCTGGTTATAAAGAAAATTGAGGAAGCAGGATTTTCACGTGACAGCTTCTACATTCATTGTGATGGGGCTCTGTTTGGTCTCATGTTACCTTTTGTGAAACGTGCTCCAAAAGTTTCTTTCAAGAAGCCTATAGGGAGTGTGAGTGTTTCTGGGCACAAGTTCGTGGGAAGCAGGAACGGGCACGCCCCCATATTCCTCTGGTACAGTCTAAACATGAAAGGGTACAGAGGTTTGCAGAAAGAGGTGCAGAAGTGCTTGCGCAATGCACACTACTTCAAAGGTCAGCTTGTGGAGGCAGGCATTGGAGCAATGGTGAACGAGCTGAGCAGCACGGTTGTGTTCGAGAGACCACATGATGAGGAGTTCGTGCACAAGTGGCAGTTGGCATGCCAAGGAAACATTGCTCATGTGGTGGTGATGCCAAATGTCACCATAGAGAAGCTTCATGATTTTCTCAATGAACTCCTGCAGAAGCGTCAAGAGTGGTTCCGAGATGGGAAGTGCCAACCACGTTGTATAGCTTCTGCTGTGGGACATGAAAATTGCCTCTGTTTTATCCATAGGTGA 1485 0.4404 MAEFWLEAHGLFVALRFFFLFDNQLVCSVCQIISCAASSKMAGSVDVLAPDSSINGTMKPLPEVFNSTAFITDHVHVPLMAEEDDIAGKGEAQNGTENGERNIVLGRNIHTMCLEVSEPDIDDEVTGEREAYMASVLAKYKKSLTERTKYHLGYPYNLDFDYEALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITNCGTEGNLHGILVGREVFPDGILYASEESHYSVFKAARMYRMECVKIDTLCSGEIDCDDFKAKLLCHKDKPAIVNVNIGTTVKGAVDDLDLVIKKIEEAGFSRDSFYIHCDGALFGLMLPFVKRAPKVSFKKPIGSVSVSGHKFVGSRNGHAPIFLWYSLNMKGYRGLQKEVQKCLRNAHYFKGQLVEAGIGAMVNELSSTVVFERPHDEEFVHKWQLACQGNIAHVVVMPNVTIEKLHDFLNELLQKRQEWFRDGKCQPRCIASAVGHENCLCFIHR* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2107 494 PANTHER SERINE DECARBOXYLASE 41 362 - -
Pvu2g2107 494 PANTHER SERINE DECARBOXYLASE 361 494 - -
Pvu2g2107 494 Pfam Pyridoxal-dependent decarboxylase conserved domain 238 363 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pvu2g2107 494 Gene3D Aspartate Aminotransferase, domain 1 375 466 IPR015422 GO:0003824
Pvu2g2107 494 SUPERFAMILY PLP-dependent transferases 137 468 IPR015424 -
Pvu2g2107 494 Gene3D - 185 374 IPR015421 GO:0003824
Pvu2g2107 494 PANTHER - 41 362 - -
Pvu2g2107 494 PANTHER - 361 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2107 Pvu-Chr2 36490051 36492899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2107 251 360 Calmodulin-binding Proteins AT1G65960 30.435 2.44e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2107 2 36490051 36492899 Pvu6g2165 6 31103236 31107592 PCT