Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2105 ATGAAATATCACAGGAAAGTAGTGCAAGAGTTGAAGCCTGCGTCGCTGATGGTGCTAGCGCAGGTTGCAACTGCTGCTGTGAATGTGCTTTACAAGTTGGCCATAAATGATGGAATGAGTATTCCGGTACTCACTTCCTACCGTCACATTTTCGGAGCTGCTTTCTCTCTTTCTCTTGCTCTTGTTATAGAAAGAAAGAGCAAGCCAAAGTTGACATGGAGGGTGCTTTTGATGTCATTTTTTTGCGGTCTATTTGGAGGGAGTTTAGCGCAAAACCTTTATTTCATTGGTTTGGCTTGGGTATCAGCAACATTTTCTACTTCCCTTTATAATCTCGTTCCAGTGGTCACTTTTATCTTCTCTGTTTTGTTCAGGTTAGAAAAGTTAAGTTTGCGAACCGCTGCAGGGAGGGTGAAGGTGTTGGGACCAATAATAGGAATTGTTGGGTCAATGCTGCTGACATTTAACAGAGGGGCAGAAATTAAGATTTGGAGCTTCCACACTAATCTTTTGCATAAAAATCAAAATGGGCACCTAGGATCATCGCATGCTGACTCTGGAAGAAGATGGGTAGGTGTTTTATGTGGTCTTGGAAGTGTTCTAAGTTTTTCATCATGGCTCATCATTCAGACCAAGATGAGTAAAGAATATCCAAGCCATCTTTCAAGTACTGCATTGATGACCTTAATGGGGGCAATACAAGCCACAGTCTTTGCTTTATGTGTTGAGAAGGATTGGAGCCAATGGAGGGTGGGTTGGAGTATCAGGCTTCTAACTGCTGCCTTTTCAGGAATTGTGGTCTCTGGATTAGTTGTTATTGTCACTGCTTGGTGTGTTGGGGTTAAGGGTCCATTGTATGCATCTGTTTTCAACCCTCTCTCGCTTGTGATTGTGGCTATTTTTGCTCCCTTGCTGTTGGATGAAAATCTATATCTAGGAAGTGTAATCGGAGCAGTGCTTATTGTGTGTGGGTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATAAAAACATCATCAGAAGAAACCGAAAATGTTGAAGCGAGTGCGGGTGTTGAAATTACCACAGTGGGTCGTGACAATATATAG 1089 0.4252 MKYHRKVVQELKPASLMVLAQVATAAVNVLYKLAINDGMSIPVLTSYRHIFGAAFSLSLALVIERKSKPKLTWRVLLMSFFCGLFGGSLAQNLYFIGLAWVSATFSTSLYNLVPVVTFIFSVLFRLEKLSLRTAAGRVKVLGPIIGIVGSMLLTFNRGAEIKIWSFHTNLLHKNQNGHLGSSHADSGRRWVGVLCGLGSVLSFSSWLIIQTKMSKEYPSHLSSTALMTLMGAIQATVFALCVEKDWSQWRVGWSIRLLTAAFSGIVVSGLVVIVTAWCVGVKGPLYASVFNPLSLVIVAIFAPLLLDENLYLGSVIGAVLIVCGLYMVLWGKSKEIKTSSEETENVEASAGVEITTVGRDNI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2105 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
Pvu2g2105 362 PANTHER WAT1-RELATED PROTEIN 12 341 - -
Pvu2g2105 362 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016021|GO:0022857
Pvu2g2105 362 Pfam EamA-like transporter family 13 141 IPR000620 GO:0016020|GO:0016021
Pvu2g2105 362 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Pvu2g2105 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2105 Pvu-Chr2 36468883 36471341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2105 11 360 Nodulin-like Gene Family AT1G25270 40.169 1.02e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2105 - - var:108326689 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2105 2 36468883 36471341 Pvu2g2105 2 36468883 36471341 ECH
Pvu9g1519 9 21517316 21520296 Pvu2g2105 2 36468883 36471341 ECH
Pvu2g2105 2 36468883 36471341 Pvu6g2172 6 31167753 31172837 PCT