Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2104 ATGAATCGTATAGTGAAAGTGGTGCAAGAGTTGAAGCCTCCCTTGCTGATGGTGCTGGTGCAGGTTGCATATACCGGAAACACTCTGATTGCCAAACTTGCCATAAGTGATGGAATGAGCATTAGTGTATATAGTGCCTACCGTCACATTTTGGGAGCTGCTTTCACATTTTTGCTTGCTCTTATTTTCGAAAGAAAGAACAGGCCAAAGTTGACATGGAGGGTGCTGGTGATGACATTTTTTTGCGGATTATTTGGAGGGAGTTTATTCCAAAATCTTTTTTTCACCGCGGTGGCGTTCGTATCTGCAACATATGCTAACGCTATTTTCAATATGATTCCTGTGGTCACTTTCATCCTCTCCTTCCTTTTCGGCTACGAAAAGTTAAATTTGCAAAGCGCAGCAGGGAAAGCTAAGGTGATGGGAACGATAATTGGAGTTAGTGGTTCAATGGTGCTGTCATTCTTGAAAGGGGTAGAAATAAATATTTGGAAGAATATTCACATGAATGTTATGCATAAAAAGGAGAATAGTCGAATAGGAGCATCAGATGGAAGACAGTGGATAGGTGTTCTAAGTGGTATTGGATGTTGCTTCAGTTTTTCAGTATGGCTCATCATTCAGGCTAAGCTGAGTAAGGAATATCCCAGCCACCACTCAAGTACATCGTTAATGAATTTAATGGCGGCAATACAAGCCACACTCTTTGCCCTTTGTGTTGAGAAAAATTGGAATCAATGGAAGTTGCCTTCGGCTATTAGGGTTCTGGCGGCACTCTATTCGGCAATTGCGGTAACTGCATTTGTGAATATTGTGACTTCATGGTGTGTGCGGAAGAGAGGTCCATTATATGCATCTGTGTTCAATCCCCTTAGCCTTGTCCTCGTGGCTGTTGCTGCTGCCCTGTTGTTACAAGAGAAACTATACCTAGGAAGTGTAATTGGTGCTATGCTTATTGTGTGTGGCTTGTACATGGTGTTGTGGGGTAAAAGCAAAGAAATGAAACCACCAACTGATTTGGAGAGAGAATTAAGAACGACTGAGGTTGTTGTCATGTCTGCGAACGAGAAGAGTGACCATGTTAGCAGTAACGTGGTGAATAGTAAGAGCAACATTGTAACAAAGGCTCATAAAGGAATCTTTGGAAATGGTGATCATGAAATATTGAAAACAATAGTGGAAAGGAATTGA 1191 0.4165 MNRIVKVVQELKPPLLMVLVQVAYTGNTLIAKLAISDGMSISVYSAYRHILGAAFTFLLALIFERKNRPKLTWRVLVMTFFCGLFGGSLFQNLFFTAVAFVSATYANAIFNMIPVVTFILSFLFGYEKLNLQSAAGKAKVMGTIIGVSGSMVLSFLKGVEINIWKNIHMNVMHKKENSRIGASDGRQWIGVLSGIGCCFSFSVWLIIQAKLSKEYPSHHSSTSLMNLMAAIQATLFALCVEKNWNQWKLPSAIRVLAALYSAIAVTAFVNIVTSWCVRKRGPLYASVFNPLSLVLVAVAAALLLQEKLYLGSVIGAMLIVCGLYMVLWGKSKEMKPPTDLERELRTTEVVVMSANEKSDHVSSNVVNSKSNIVTKAHKGIFGNGDHEILKTIVERN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2104 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 147 - -
Pvu2g2104 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 332 - -
Pvu2g2104 396 PANTHER WAT1-RELATED PROTEIN 12 337 IPR030184 GO:0016021|GO:0022857
Pvu2g2104 396 PANTHER WAT1-RELATED PROTEIN 12 337 - -
Pvu2g2104 396 Pfam EamA-like transporter family 13 138 IPR000620 GO:0016020|GO:0016021
Pvu2g2104 396 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2104 Pvu-Chr2 36454138 36462937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2104 11 372 Nodulin-like Gene Family AT1G25270 37.017 6.81e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2104 - - var:108326681 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2104 2 36454138 36462937 Pvu2g2104 2 36454138 36462937 ECH
Pvu2g2104 2 36454138 36462937 Pvu6g2175 6 31187626 31189850 PCT
Pvu6g2174 6 31181086 31182728 Pvu2g2104 2 36454138 36462937 PCT