Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2100 ATGCGTCCACCGCGGAAGAAGGTGAGTTTTCGCTCCGGCGACAAGGTGGAGGTGTGTAGCAACGAGGAGGGCTTCTTCGGCTCCTACTACCTCGCCACGGTTGTGTCGGCTCTCAACACCGGCCTTTACGTCGTACGCTACCACACGCTGCTCGAAGATGACGAGTCCCAACCGCTCACGGTAACCGTCTTCCCCAAAGAGCTCCGCTATAAGCCTCCGCGCATCGCCGCCTCCTCCTTCGCGCTCTACCAGCGCGTCGACGCCTTCGACAATGACGGCTGGTGGGTCGGCGAGATCACCGGCAAGGTCGGCCTCAACCACTACTATGTATACTTTTCCACCACTCACGAGGAAATCCTGTACCCCGCCTCCGCAATTAGGGTTCACCAGGAGTGGATCAACGGCCAATGGATTCGCTCCAATTGA 426 0.5892 MRPPRKKVSFRSGDKVEVCSNEEGFFGSYYLATVVSALNTGLYVVRYHTLLEDDESQPLTVTVFPKELRYKPPRIAASSFALYQRVDAFDNDGWWVGEITGKVGLNHYYVYFSTTHEEILYPASAIRVHQEWINGQWIRSN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2100 141 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 140 - -
Pvu2g2100 141 SMART agenet_At_2 8 76 IPR014002 -
Pvu2g2100 141 SMART agenet_At_2 78 134 IPR014002 -
Pvu2g2100 141 Pfam Agenet domain 13 73 IPR008395 -
Pvu2g2100 141 Gene3D - 1 80 - -
Pvu2g2100 141 PANTHER - 7 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2100 Pvu-Chr2 36413102 36414149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2100 20 132 PHD Transcription Factor Family AT5G58610 31.343 1.63e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2100 - - gmx:121175082 213.001