Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2083 ATGGGTAGAGTCCAAAACCCCACAAAGATGGAAATTGATCTCTCTTTGAAGATAGATACTGATGATGAACAAAAAGCACAAGCAGATGAGCAACTCAAAGAGTATAACCAGGAAGAAATGGCACAGATTCCGGATAATAATAACAAGGAAGAAGTCCCTGAAACTACAGCTGGTGAAATAGAAGATGATGCATCAGTGGTGGAAACATCTTTGCAAGATAACACAAAAACCAAAGAGTTAAGTGTCCTGCAAATGGAGATGGAAAGCATGAAAGAGGAAAACAAAGTTCTGAGGAAAGTTGTAGAACAAACAATGAAAGACTATTATGATCTGCAAATGAAATTCTCAGCTATCCAGGAAAACAATAAAAGAAAGGATCATGAAATTTCTCTCTCACTTCAAGACATTGCGACCAGCAGCGGTGAAGGACCATCGAGAATTCTTGAGATGGTTAATAAAAAAATAAAAAGTGCTCCATCTCCTCCTAACACTGATGATGATAGTTTAAGCGAGAGTGAATTGGGTTTATCACTGAGGTTGCAACCAAGCACGAGTCAAAAAGAAAGTGATGTGGGAAACAAGGAAGAGAGAAAAGATCAACAATTGGCAAGTTTTGTATCAGTGCAGAACAAACTACAGCGGAATCATGAGTTGCCTGGTATTACTACCCATGCTATCACCCCTCCAAACAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAGCTGCCACAATGAATGATGGGTGCCAATGGAGAAAATATGGGCAGAAAATTGCAAAGGGAAATCCATGTCCACGAGCCTATTATCGTTGCACTGTAGCCCCAGGTTGCCCCGTTAGGAAACAGGTACAGAGATGTATAGATGACATGTCCATTCTTATTACAACCTATGAAGGGACACATAATCATCCACTCCCTGTGGGTGCAACTGCCATGGCTTCTACAGCTTCTGCAGCAGCTTCCTTCATGTTGCTAGATTCAAGCAACCCTATTTCAGATGGAACCTCTAGTTTCACTCAAGCACCCCTTCCTTACACCTTCCACTCATTAAACCCAGCTTCGAATTTCAGGAGCATAAACTCCAGTGATCCATCCAAAGGAGTTGTTCTTGACCTCACAAGCAACCTCAGTGAACCACTACGTTTTTCTACTGGTAGCTCCTCCAATACTACAACTGAGAGTCGCTTTTCTTGGATGCCAAACAAATACCAAGGTGGTGGTGCAATTACAATGAACAACAATTTTCACAAGCCTAGACCAGTGGACATTCATGATAGAATTTGGAAAGGAGAAGAAAGCAAGCCACTAGAAGACAATGTGTCCGCAATTGCCTCAGATCCTAAGTTTAGGGTTGCTGTTGCTGCAGCCATAACATCTCTCATGAATAAAGAGAGCCACACTGCTACTCATCCTATTGGGACTTCCTTTGGTCCTAGGAGTGGCCAAAATGGTACCTAG 1461 0.4209 MGRVQNPTKMEIDLSLKIDTDDEQKAQADEQLKEYNQEEMAQIPDNNNKEEVPETTAGEIEDDASVVETSLQDNTKTKELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQMKFSAIQENNKRKDHEISLSLQDIATSSGEGPSRILEMVNKKIKSAPSPPNTDDDSLSESELGLSLRLQPSTSQKESDVGNKEERKDQQLASFVSVQNKLQRNHELPGITTHAITPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPISDGTSSFTQAPLPYTFHSLNPASNFRSINSSDPSKGVVLDLTSNLSEPLRFSTGSSSNTTTESRFSWMPNKYQGGGAITMNNNFHKPRPVDIHDRIWKGEESKPLEDNVSAIASDPKFRVAVAAAITSLMNKESHTATHPIGTSFGPRSGQNGT* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2083 486 Coils Coil 80 107 - -
Pvu2g2083 486 MobiDBLite consensus disorder prediction 14 36 - -
Pvu2g2083 486 Gene3D WRKY domain 231 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2083 486 SUPERFAMILY WRKY DNA-binding domain 239 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2083 486 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 471 IPR044810 GO:0003700
Pvu2g2083 486 MobiDBLite consensus disorder prediction 156 200 - -
Pvu2g2083 486 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2083 486 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2083 486 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 11 471 - -
Pvu2g2083 486 MobiDBLite consensus disorder prediction 1 59 - -
Pvu2g2083 486 Coils Coil 18 38 - -
Pvu2g2083 486 MobiDBLite consensus disorder prediction 466 486 - -
Pvu2g2083 486 MobiDBLite consensus disorder prediction 157 188 - -
Pvu2g2083 486 Pfam WRKY DNA -binding domain 247 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2083 Pvu-Chr2 36234759 36237703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2083 83 368 WRKY Transcription Factor Family AT1G68150 50.667 1.55e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g2083 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2083 - - var:108321024 798.505