Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2082 ATGGACTGGAGGCGTCGGACCAAGAAGCAGGCTCAGGCTCAGGCTCAGGCTCAGCCTCAGGCTCAGGCTCAGCCTCGGTTGGAGCGCCTCAACGCCAAAAAGGGCTTCAATTACCAACCACCACCCTCTCCACCATCTCCCTCTTCCACCCATTTGGATCGCCAAACCAGCTTCCGTCTCTTCGGCATCGACGGCGAGTTCGACCGCATCTTCAAGACCTTGGGCCTCTCCGGCCCGGAGGACTTCTCCATCCCAGCCGCTGACTGGGAAGCCCGAAAGGCCCGCGTTGCTTCCTCCAACGCCGCCGGGCCCACCACTACCTCCCACGCGCTTATCCACGCTTCTCCCGAGATCCAATCTCTTTCCGTCACCGCAACTTCTGCGGCTACCCTCCAAGGCGACGTCGTTTCCCTTCGCGATTCCGTTCTGGGTTCCTCCCCTTGGTCCTCCGGGGAGCATGACGCGGGTAAAGGTAGTGTCGGCCGGTTGAGAAACGGAGAAAGGAGCGTGCTTTTCACCGATTCAGGTTCCTTCACCACTTCCCACGATGATGACAGTGACATTGGCGGCGAGAGGGTTTATTCGGTTTCTAATTCCGCCGCGCCGGATGAGCTGGCTGTGCCTTATGTCTCCTCCTTTTCCTTTGAGTGGTTCAGACAGACTTTCTCCTCCTGGCAAAAAGGTGACGTCTTGGGAAATGGGTCTTTCGGAACCGTCTATGAAGGCTTCACTGATGAGGGATTCTTTTTTGCGGTTAAGGAGGTGTCTTTGCTGGATGAAGGTACTCAGGGAAAACAGAGCATTTCCCAGCTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAGCATAAAAACATAGTTCGATATTACGGCTCGGACAAGGACAAAAGTAAACTATATATCTTCCTTGAGCTTATGTCAAAAGGGTCATTAGCAAGTCTCTACCAAAAGTATCTTTTAAACGATTCCCAAGTTTCTGCATACACAAGGCAGATTTTATGTGGCTTGAAGTATCTTCATGAACATAATGTGGTTCACAGGGACATCAAGTGTGCTAATATACTGGTTGATGTAAGTGGGGCAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAATTTAATGATGTGAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTTAACTTAAAGGACCAAGGTGGTTATGGGTTAGCCGCCGATATATGGAGCTTAGGGTGTACAGTTTTGGAGATGTTGACACGCCAACCTCCTTATTCGGATTTGGAAGGAATGCAAGCATTATTTCGGATTGGCAAGGGTGTACCTCCCCGTATTCCGGATTATTTATCTAAGGATGCCCGAGATTTCATCCTTGATTGCTTACAAGTTAACCCAAATGAACGTCCAACGGCAGCTCGGCTATTGGATCATCCATTTCTAAGGAGACCATTACTGTCTCCCTTAAGTTTTGCTTCTCCCCAAAGGAATATGTATCGGTCATAA 1500 0.5007 MDWRRRTKKQAQAQAQAQPQAQAQPRLERLNAKKGFNYQPPPSPPSPSSTHLDRQTSFRLFGIDGEFDRIFKTLGLSGPEDFSIPAADWEARKARVASSNAAGPTTTSHALIHASPEIQSLSVTATSAATLQGDVVSLRDSVLGSSPWSSGEHDAGKGSVGRLRNGERSVLFTDSGSFTTSHDDDSDIGGERVYSVSNSAAPDELAVPYVSSFSFEWFRQTFSSWQKGDVLGNGSFGTVYEGFTDEGFFFAVKEVSLLDEGTQGKQSISQLQQEISLLSKFEHKNIVRYYGSDKDKSKLYIFLELMSKGSLASLYQKYLLNDSQVSAYTRQILCGLKYLHEHNVVHRDIKCANILVDVSGAVKLADFGLAKATKFNDVRSSKGSPYWMAPEVVNLKDQGGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFRIGKGVPPRIPDYLSKDARDFILDCLQVNPNERPTAARLLDHPFLRRPLLSPLSFASPQRNMYRS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2082 499 Pfam Protein kinase domain 226 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2082 499 Gene3D Transferase(Phosphotransferase) domain 1 223 496 - -
Pvu2g2082 499 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 18 110 - -
Pvu2g2082 499 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 186 481 - -
Pvu2g2082 499 MobiDBLite consensus disorder prediction 1 53 - -
Pvu2g2082 499 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Pvu2g2082 499 SUPERFAMILY Protein kinase-like (PK-like) 222 490 IPR011009 -
Pvu2g2082 499 MobiDBLite consensus disorder prediction 10 25 - -
Pvu2g2082 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
Pvu2g2082 499 PRINTS Tyrosine kinase catalytic domain signature 303 316 IPR001245 GO:0004672|GO:0006468
Pvu2g2082 499 PRINTS Tyrosine kinase catalytic domain signature 338 356 IPR001245 GO:0004672|GO:0006468
Pvu2g2082 499 PRINTS Tyrosine kinase catalytic domain signature 405 427 IPR001245 GO:0004672|GO:0006468
Pvu2g2082 499 PRINTS Tyrosine kinase catalytic domain signature 448 470 IPR001245 GO:0004672|GO:0006468
Pvu2g2082 499 ProSiteProfiles Protein kinase domain profile. 225 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2082 499 SMART serkin_6 225 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2082 499 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 186 481 - -
Pvu2g2082 499 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 18 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2082 Pvu-Chr2 36221878 36227416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2082 26 98 MAP Kinase Kinase Kinase AT4G08500 37.209 4.75e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu2g2082 Pkinase 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2082 - - gmx:100820552 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2082 2 36221878 36227416 Pvu6g2191 6 31292079 31295880 PCT
Pvu6g2198 6 31358955 31362553 Pvu2g2082 2 36221878 36227416 PCT