Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2078 ATGTGCAACATCCTTGGTCCAATTATGGACAACTATCAAGGTGATTTAAGCGACATAATTCGTGCTAGTGGTGCATCATATGGCAGTTGCAGCATGGGAACTTCATCATCTAAAGCTTGTGCTCCGTTTTCTCTCGATCACTTCTCTTCTGTTTTGGAAGGGTTTAATAGCAACTTTGGTGATCCGTTCTCAAACACGAGAGATCCCTTTCTACATGAGCTTGAATTGCCTGCAGCCTCTGCTGCCTACTTTAACAGCACAACAAGTTCTGCAGAAATTAGCAGTTCTGGGGCATTGGAAGAAGCAACTTGTTTCCGTGATGGGGTTGCTGGTAATAGTAATAGTTGTGTTTTGAAAGAAACGATTCTTGAGGATGATGACATGAGAAGGCCTTGTAATAGCATATTGGCAAACATGATTCAGATCTCTCCCCCCAATGATAAGTTACCCATCTTGTCAGTGGTGGATGCTTTGTCACGGACACTCAAGCCTTCTGGTGTGGGTTTAGGTGATAACATGACTAATGTGAAGAAGACCTTGGAAGATGATTGCTTGGTGGGCAACAGCAACAAAAAAGAAATGCAGATCTCATCTCCACAGAATCCAGGTCTTAAGAGAAGGAAGAGCCCAGCAAAAAAGTCTATTTGTGTTCCTGCACCAGCTGCACCAAACAGCAGACAAAGTGGCGAGGTAGTCCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGCTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCTCAAAGGGTTGCCCTGCCAGAAAGCAAGTTGAGAGGAGCAGAACAGATCCAAACCTGTTGGTCATTACTTACACGTCAGAGCACAACCATCCATGGCCAACTCACAGAAATGCTCTCGCTGGTTCTTCTCGATCCCAACCTTCATCCAAGGGCAACAACATTGGTGCTTCAAAGAATTCAGAAACCAGCCACCAAAACGAGGAAGAGCAGCATGAGGACAGCAACAGTGACAGCAATAATGTAAATAATAGTGCATGTGTTCAGGAAGAGAAGCAGTTTGAGACGGATGATGGAGAATTCAGTGATATTGGACTCCCTTACAAGGCAATATCTAATGTGAAGAGCTACGAACAACTTGATCAGGGTTTGTTTGCAGAATTGGGAAAAATACAAAAAGCTCACTCACTAAACCTAATCTCTCCACCACAAGGTTTTGATGATCAGCAAAGGGAATCCAACGCTTTAGATTCATTCCATAGCTTTGACTGGAGCGGTGATAACAGCACCAAGTTCCACCTTATTTGA 1308 0.4396 MCNILGPIMDNYQGDLSDIIRASGASYGSCSMGTSSSKACAPFSLDHFSSVLEGFNSNFGDPFSNTRDPFLHELELPAASAAYFNSTTSSAEISSSGALEEATCFRDGVAGNSNSCVLKETILEDDDMRRPCNSILANMIQISPPNDKLPILSVVDALSRTLKPSGVGLGDNMTNVKKTLEDDCLVGNSNKKEMQISSPQNPGLKRRKSPAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNLLVITYTSEHNHPWPTHRNALAGSSRSQPSSKGNNIGASKNSETSHQNEEEQHEDSNSDSNNVNNSACVQEEKQFETDDGEFSDIGLPYKAISNVKSYEQLDQGLFAELGKIQKAHSLNLISPPQGFDDQQRESNALDSFHSFDWSGDNSTKFHLI* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2078 435 MobiDBLite consensus disorder prediction 189 231 - -
Pvu2g2078 435 SMART WRKY_cls 233 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2078 435 MobiDBLite consensus disorder prediction 190 204 - -
Pvu2g2078 435 Gene3D WRKY domain 222 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2078 435 MobiDBLite consensus disorder prediction 258 343 - -
Pvu2g2078 435 Pfam WRKY DNA -binding domain 235 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2078 435 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 13 427 - -
Pvu2g2078 435 ProSiteProfiles WRKY domain profile. 228 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2078 435 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 13 427 IPR044810 GO:0003700
Pvu2g2078 435 MobiDBLite consensus disorder prediction 277 322 - -
Pvu2g2078 435 SUPERFAMILY WRKY DNA-binding domain 231 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2078 Pvu-Chr2 36152085 36156289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2078 1 428 WRKY Transcription Factor Family AT1G30650 40.535 1.06e-77 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g2078 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2078 - - vra:106752855 695.656