Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2072 ATGGCTACCATTTTTTCAACTTGCTACCTGTTTCTTCCCATGATTTTATCGTTATTCCCCACAACACTGTGTGCAACAGTGGTAGAAGACCTCAAAAACTTACATCAACCCCCAGGCTTTAACTCTACAATTCTGTCCAACTGTCTCAAGAACCCATCTCTTAGGTACTGCAGTTCGTCTCCAATCATGGACTTTGATGAAATATTCAAGTTTACTATTGTTGCAAGCCATCTCTGCAATGAATCAAAGAACCCCAATTGTGTAGAGTCATTCCCCAAAGTTGATCTTAGAAACCGTCCAAATATTGCACCACTTTATTTGTCCTTTGATTTCTTTTGGAAGTATTGCCCCTTCACCATTATGTCCATTGATTTGTCCAACAATTCTATCAAGGGTGGTTTTCCAACCGATGTTTTCTTTTGCACCCAAATCCACTCTCTTGATCTAAGTATTAATGCATTTTCTGGTGACATTCCAATTCAAAGTTTCTCTTCCTTCACCAACCTCACTTTTCTCAACCTCTCCTATAATTATTTTTCAGAGAGTAAACTGTCTGATTCCCAATTCTTCAAAAGGTTTAATTCTTCTAGTTTTCTTCATTCTGGTGCTCTCTTGGATCAAAAAAGGTTTACTGTGAAGGCTGTTGTTCTGTTAGTTTGCTTTCCCATCCTTGTCATTTTTCTGGTAATTTGCTTGGTATGGCTTTGTTTCCAAAGGCCTGATTTTCTCCCAAGTAAACTTCAAAGAGGTAGGAGGTTTACACCAGCAATTCTAAAGGCAGCAACGGATGGTTTTTCAAAGAAGTATTTGGTGGGGATGAGTGATGTTGTTCACATCTACAAAGGGATCTTGAGAGATGGTACTGAAGTGAAAATTGAGATGTACTGGGATGATATACCAAGGGATAGTTACCGTAGATTTGTTGACGAATGCGAGGTTCTGTCTAAGTTACACCACAAAAACCTTGTCAGAGTTTTGGGGTGGTGTAAGAGCAGGAAATTCAGGGCCATTATAACAGAATGGACAAGAGAAGAAAATGTTGAAATGTGGTTATCAGGGTCAGGTTCACCATGGAAGCATAGAGTGAAAGTGTTAATGGGGGTTGTAGAATGCATGCGTTATATGCAGAAGGAATGGCCTGAAATTGACTATGAACTCGACACAAGTAGTATTTTGTTGTCTGACAAAATGGAACCATTGATTTCAAGGTTCAAAGTTGGAGATCACAACAGAAATCAAAGAAAGATACATAGGTTTGGAATATTTCTGCTGGAGATGATACTAAATAAGAAGGTTGAAGAGGAGCTTGATGGAGGTGATGCTGGATTTATTAGGAACATGAGAAACCTTAATCATGGAGATTTGCAGCAGATGATTGATGAGAGAATGGAAGTAACTGAAACAAATTTTGAGCAAGTTAAGCAGGCACTGTCTCTAGGATTAATGTGCATAGATGAATCAATTAGTGAGAAGCCAAGTTTGGGCATGATACTTAACTCTGTAGCAAGAGCCTACAAAACTAGCCTTGTTTTGCCATCTGCAAACCATAGAACATTTAAGGGACACATGCCTCTTCAAACCAATTAA 1587 0.3882 MATIFSTCYLFLPMILSLFPTTLCATVVEDLKNLHQPPGFNSTILSNCLKNPSLRYCSSSPIMDFDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIAPLYLSFDFFWKYCPFTIMSIDLSNNSIKGGFPTDVFFCTQIHSLDLSINAFSGDIPIQSFSSFTNLTFLNLSYNYFSESKLSDSQFFKRFNSSSFLHSGALLDQKRFTVKAVVLLVCFPILVIFLVICLVWLCFQRPDFLPSKLQRGRRFTPAILKAATDGFSKKYLVGMSDVVHIYKGILRDGTEVKIEMYWDDIPRDSYRRFVDECEVLSKLHHKNLVRVLGWCKSRKFRAIITEWTREENVEMWLSGSGSPWKHRVKVLMGVVECMRYMQKEWPEIDYELDTSSILLSDKMEPLISRFKVGDHNRNQRKIHRFGIFLLEMILNKKVEEELDGGDAGFIRNMRNLNHGDLQQMIDERMEVTETNFEQVKQALSLGLMCIDESISEKPSLGMILNSVARAYKTSLVLPSANHRTFKGHMPLQTN* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2072 528 Gene3D Ribonuclease Inhibitor 45 209 IPR032675 -
Pvu2g2072 528 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 520 - -
Pvu2g2072 528 SUPERFAMILY L domain-like 86 182 - -
Pvu2g2072 528 ProSiteProfiles Protein kinase domain profile. 265 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g2072 528 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 520 - -
Pvu2g2072 528 Pfam Protein tyrosine and serine/threonine kinase 277 404 IPR001245 GO:0004672|GO:0006468
Pvu2g2072 528 Gene3D Phosphorylase Kinase; domain 1 241 341 - -
Pvu2g2072 528 SUPERFAMILY Protein kinase-like (PK-like) 243 501 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2072 Pvu-Chr2 36061605 36063301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2072 112 498 Receptor kinase-like Gene Family AT1G51890 23.318 1.07e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu2g2072 PK_Tyr_Ser-Thr 1.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2072 - - gmx:100779045 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2072 2 36061605 36063301 Pvu2g2072 2 36061605 36063301 ECH