Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2040 ATGAAGCATGGAATGGAAGACTATATTTTTGCTCAACACAGGAATCTCGATGGCTATGACTTAGGATTGTATGCAATATTTGATGGTCACTCCGGTCATGAAGTTGCAAAATACTTGCGAAGCCATCTATTCGAAAATATACTGAGTGAGCCTGGTTTCTGGGAAAATCCAGTGCAAGCTATTAAGAAAGCATGCAAAGCAACAGATGATGAGATTTTAGAAAACGTAGCTGATTCACGTGGAGGATCAACTGCAGTTGCAGCAATACTAGTCAATGGAGTAAAGCTACTGGTCACCAACGTTGGTGATTCTCGGGCAATATCATGCAAAAATGGTCGAGCAAAGCCACTTACTGTGGATCATGATCCAGAGAAGGAAAAAGATCTTGTTGAGAGCAGAGGGGGTTTTGTGTCTAAGAGACCCGGGAATGTTCCAAGAGTGGATGGCCAATTAGCAATGACACGGGCATTTGGAGATGGAAAACTAAAGGAGCACATTACGGCAGAACCAGATATGAGCATTCAGAAGATTGATGAAGACACTGAATTCATTATTTTGGCAAGTGATGGTCTATGGAAGGCTTGTGACTGTATCAAGAATGTGGATGGTGCGCAGAAAGCATCTAAGAAGTTAGTTAAAGAAGCTAAATCTCTAGGAAGCTATGATGATATTTCATGCATAGTTATAATGTTCTAG 696 0.4109 MKHGMEDYIFAQHRNLDGYDLGLYAIFDGHSGHEVAKYLRSHLFENILSEPGFWENPVQAIKKACKATDDEILENVADSRGGSTAVAAILVNGVKLLVTNVGDSRAISCKNGRAKPLTVDHDPEKEKDLVESRGGFVSKRPGNVPRVDGQLAMTRAFGDGKLKEHITAEPDMSIQKIDEDTEFIILASDGLWKACDCIKNVDGAQKASKKLVKEAKSLGSYDDISCIVIMF* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2040 231 CDD PP2Cc 1 229 IPR001932 -
Pvu2g2040 231 ProSiteProfiles PPM-type phosphatase domain profile. 1 231 IPR001932 -
Pvu2g2040 231 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 1 231 - -
Pvu2g2040 231 Pfam Protein phosphatase 2C 3 223 IPR001932 -
Pvu2g2040 231 Gene3D - 1 231 IPR036457 -
Pvu2g2040 231 PANTHER ALPHABET, ISOFORM E-RELATED 1 231 - -
Pvu2g2040 231 SMART PP2C_4 1 229 IPR001932 -
Pvu2g2040 231 SUPERFAMILY PP2C-like 2 231 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2040 Pvu-Chr2 35687922 35690424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2040 3 231 PP2C-type Phosphatase Gene Family AT3G15260 57.627 2.03e-93 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2040 - - gmx:100814772 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2040 2 35687922 35690424 Pvu2g2040 2 35687922 35690424 ECH