Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2030 ATGGAAAAGGAGCCTCTGCTCCCATATTTCAGCCCCAGAAAGAAGCCTCAACCATTGTCACCGCTATGTCCTTTGCCAGAGCACGATGAAATGGTTCTTCCAATGACCCCCATGGAATTCAAGGACCGTCTCATCTTTGGTCCTGTTTGTGCTTCTCCAAGGGACCCTTCACCTTTGGCCGATGCCTTAACACTCCCCCTCAATTCCCCAAAATGTTCCTCTTCTGCCGCGCAGGACTATGCATCGCCGTCACGGTTTGATTCCCAGCAGCAACAGCTATCTTCTTGGCTCCTTGACCCCAATTACTCCTGGCGGAAAACAAACCTTCACCGCTCCAAAACCGCGCCGGCCATGGCGGTGATAAGCGATTTCAACCCCCAATCCTCTGTTCCTAGGCCGCAATTTGGCAGCCAGAGTGTTGTGCGGCAGGGTGTGATTCTTCTTGTTCTTTATCTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCTACTGAAACTCATCCTGTAGTTGATGCATTGTATTTTTGTATAGTCACAATGTGCACAATAGGATATGGTGACATCACTCCAAATAGCACAGCAACTAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGCTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCAGTGAAGGGGAGGAGGGGTGAGAAGGACGGGAAGTCCTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGATTGAAGGTGGCACTGGCGTTGGGAGTTGTGGTGATTTGTATTGGGATAGGTGTGGCGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGACTCTTTTTATCTTTCAGTTATGTCGGTTACTACGGTCGGGTATGGAGACCATGCTTTCAAGACCATGCATGGCCGGATCTTTGCTGCAATTTGGTTGCTCGTGTCAACGCTTGCTGTGGCTCGAGCGTTCCTCTATTTGGCCGAGGCAAGAGTGGATAAGCGGCAGAGGAGGATGGCGAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATAGACAACAATGGCTTTGTGAGGTATGGACTGATTCATTTTGATCTCATAAAAATTCAGTGA 1170 0.4718 MEKEPLLPYFSPRKKPQPLSPLCPLPEHDEMVLPMTPMEFKDRLIFGPVCASPRDPSPLADALTLPLNSPKCSSSAAQDYASPSRFDSQQQQLSSWLLDPNYSWRKTNLHRSKTAPAMAVISDFNPQSSVPRPQFGSQSVVRQGVILLVLYLALGVVIYWFNRHNFTATETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGIGVAVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRQRRMAKWILGQDMTVSEFLAADIDNNGFVRYGLIHFDLIKIQ* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2030 389 PANTHER TWO-PORE POTASSIUM CHANNEL 3 89 377 - -
Pvu2g2030 389 SUPERFAMILY Voltage-gated potassium channels 255 359 - -
Pvu2g2030 389 SUPERFAMILY Voltage-gated potassium channels 139 226 - -
Pvu2g2030 389 Gene3D - 247 360 - -
Pvu2g2030 389 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 89 377 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pvu2g2030 389 Pfam Ion channel 146 226 IPR013099 -
Pvu2g2030 389 Pfam Ion channel 271 340 IPR013099 -
Pvu2g2030 389 Gene3D - 139 239 - -
Pvu2g2030 389 PRINTS Two pore domain K+ channel signature 183 211 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pvu2g2030 389 PRINTS Two pore domain K+ channel signature 303 312 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2030 Pvu-Chr2 35582083 35583252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2030 4 376 Ion Channels AT4G18160 63.969 9.79e-161 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2030 K05389 - gmx:100804249 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2030 2 35582083 35583252 Pvu2g2030 2 35582083 35583252 ECH