Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g2024 ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCACAACAATCAGCAGGGCACAGGAGCAGGAGGAGGAGGATCTGACATGTACGAAAAGCACTTTTCCTCTTCCTTAATCCCTGCAGGTTCAACACCATATGATTCACAACCCTTTGATCCCTCCTACATGACCTTCACTGACTGTTTGCAAGGGGCCATGGACTACAATTCTCTTGCAACTTCCTTTGGCCTTTCTCCTTCCTCATCGGAGGTTTTCTCATCTGTTGAAGGAAACCACAAGCCTGCAGAAGGAGGAGATGGAGGTGTTGGCAGTGGTGGAAGTGAAACCCTTGCGACCCTTAACTCGTCTATCTCTTCTTCATCTTCTGAGGCTGGGGCTGAAGAAGATTCAGGAAAGAGCAAAAAGGATAGGCAGGTGAAACCAGAAGAAGAAGGAGGAGGAGGAGAAAACTCTAAGAAAGGGCACAAGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGGAATGCGGCCGCAGGAATGTTCACACCTTCTTTGCTCGCCACACCAACTCCACTTGCAGCCGGGTCAAACTTCCCTCAAGATCTCTTCCTTCACATGCATCACCACCACCCTCACCATCACTTTCACAACACCCTCTTCTCCACACAATCAACAAACGCTGTTACTACCACCACCACCACTGTTACAACTGCTGCCACTCCTCCCTCCATTTACTCTTCCTATAACATTAACAACTCTCTTCTTCACAACCAGTATCTTCCTTCTGAATATGGTCTCCTTCAAGACATAGTCCCTTCCATGTTCCACAACAAGACACACCCCCAGAATTAA 1077 0.4763 MSVEPKELYYQDLVLDHNNQQGTGAGGGGSDMYEKHFSSSLIPAGSTPYDSQPFDPSYMTFTDCLQGAMDYNSLATSFGLSPSSSEVFSSVEGNHKPAEGGDGGVGSGGSETLATLNSSISSSSSEAGAEEDSGKSKKDRQVKPEEEGGGGENSKKGHKDKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSLLATPTPLAAGSNFPQDLFLHMHHHHPHHHFHNTLFSTQSTNAVTTTTTTVTTAATPPSIYSSYNINNSLLHNQYLPSEYGLLQDIVPSMFHNKTHPQN* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g2024 358 ProSiteProfiles WRKY domain profile. 179 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2024 358 MobiDBLite consensus disorder prediction 130 174 - -
Pvu2g2024 358 SUPERFAMILY WRKY DNA-binding domain 176 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2024 358 MobiDBLite consensus disorder prediction 82 174 - -
Pvu2g2024 358 PANTHER WRKY TRANSCRIPTION FACTOR 81 20 348 - -
Pvu2g2024 358 MobiDBLite consensus disorder prediction 110 129 - -
Pvu2g2024 358 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 348 IPR044810 GO:0003700
Pvu2g2024 358 Gene3D WRKY domain 168 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g2024 358 SMART WRKY_cls 184 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g2024 358 Pfam WRKY DNA -binding domain 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g2024 Pvu-Chr2 35413372 35415513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g2024 54 350 WRKY Transcription Factor Family AT4G18170 50.329 2.84e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g2024 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g2024 - - gmx:100816891 485.337